Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.23□□□□□ -2.05
MT-ND4P03905 AC005832.3-201ENST00000537929 631 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 AC007954.1-201ENST00000554198 494 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.23□□□□□ -2.05
MT-ND4P03905 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.23□□□□□ -2.05
MT-ND4P03905 OR1M4P-201ENST00000589199 287 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 AP001429.1-201ENST00000602568 530 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 DUXAP3-201ENST00000603616 594 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 AC104763.3-201ENST00000613765 618 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 AL590099.1-201ENST00000615276 138 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 AC090132.2-201ENST00000615881 347 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.23□□□□□ -2.05
MT-ND4P03905 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
MT-ND4P03905 AL022578.1-201ENST00000439330 1433 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
MT-ND4P03905 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.23□□□□□ -2.05
MT-ND4P03905 AC010680.1-201ENST00000590024 3590 ntBASIC2.23□□□□□ -2.05
MT-ND4P03905 AL359693.1-201ENST00000614959 2407 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
MT-ND4P03905 SNORA67.1-201ENST00000364749 141 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 RNU6-76P-201ENST00000384060 104 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
MT-ND4P03905 RPS4XP7-201ENST00000406274 780 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 RNA5SP80-201ENST00000410475 111 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 RNU6-193P-201ENST00000410977 107 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 AL592148.1-201ENST00000413568 445 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.22□□□□□ -2.05
MT-ND4P03905 AL451062.2-201ENST00000427515 271 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 RPS15AP7-201ENST00000439294 405 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 RPL23AP76-201ENST00000441860 458 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.22□□□□□ -2.05
MT-ND4P03905 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.22□□□□□ -2.05
MT-ND4P03905 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.22□□□□□ -2.05
MT-ND4P03905 NANOGNBP1-201ENST00000448444 480 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 AL109741.2-201ENST00000455561 343 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 RNU7-136P-201ENST00000458819 69 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 AC073901.1-201ENST00000462471 408 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 AC126182.1-201ENST00000478134 357 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 AC011825.1-201ENST00000484967 388 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.22□□□□□ -2.05
MT-ND4P03905 AC026427.2-201ENST00000506228 536 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.22□□□□□ -2.05
MT-ND4P03905 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.22□□□□□ -2.05
MT-ND4P03905 RNU6-528P-201ENST00000516926 100 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 AC091163.3-201ENST00000518269 1144 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 AC103783.1-201ENST00000520506 373 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.22□□□□□ -2.05
MT-ND4P03905 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.22□□□□□ -2.05
MT-ND4P03905 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.22□□□□□ -2.05
MT-ND4P03905 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.22□□□□□ -2.05
MT-ND4P03905 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.22□□□□□ -2.05
MT-ND4P03905 AC090615.1-201ENST00000577519 154 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
MT-ND4P03905 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.22□□□□□ -2.05
MT-ND4P03905 MIR5092-201ENST00000583139 88 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.22□□□□□ -2.05
MT-ND4P03905 DNAJC19P3-201ENST00000594491 331 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.22□□□□□ -2.05
MT-ND4P03905 AL161629.2-201ENST00000615347 275 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 AP000720.1-201ENST00000625091 483 ntBASIC2.22□□□□□ -2.05
MT-ND4P03905 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
MT-ND4P03905 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
MT-ND4P03905 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
MT-ND4P03905 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
MT-ND4P03905 AC005539.1-201ENST00000443768 1479 ntBASIC2.21□□□□□ -2.06
MT-ND4P03905 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
MT-ND4P03905 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
MT-ND4P03905 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
MT-ND4P03905 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
MT-ND4P03905 RNU5A-1-201ENST00000362698 116 ntBASIC2.21□□□□□ -2.06
MT-ND4P03905 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
MT-ND4P03905 RNU6-952P-201ENST00000391164 108 ntBASIC2.21□□□□□ -2.06
MT-ND4P03905 AL162578.1-201ENST00000406202 378 ntBASIC2.21□□□□□ -2.06
MT-ND4P03905 AC080125.1-201ENST00000414888 684 ntBASIC2.21□□□□□ -2.06
MT-ND4P03905 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.21□□□□□ -2.06
MT-ND4P03905 CCDC58P2-201ENST00000417131 366 ntBASIC2.21□□□□□ -2.06
MT-ND4P03905 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.21□□□□□ -2.06
MT-ND4P03905 AC234781.2-201ENST00000426370 994 ntBASIC2.21□□□□□ -2.06
MT-ND4P03905 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.21□□□□□ -2.06
MT-ND4P03905 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.21□□□□□ -2.06
MT-ND4P03905 BX322784.1-201ENST00000455793 1077 ntBASIC2.21□□□□□ -2.06
MT-ND4P03905 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
MT-ND4P03905 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.21□□□□□ -2.06
MT-ND4P03905 HSPE1P6-201ENST00000479457 291 ntBASIC2.21□□□□□ -2.06
MT-ND4P03905 RPS27P26-201ENST00000494583 239 ntBASIC2.21□□□□□ -2.06
MT-ND4P03905 RPL30P5-201ENST00000494923 336 ntBASIC2.21□□□□□ -2.06
MT-ND4P03905 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.21□□□□□ -2.06
MT-ND4P03905 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.21□□□□□ -2.06
MT-ND4P03905 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.21□□□□□ -2.06
MT-ND4P03905 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.21□□□□□ -2.06
MT-ND4P03905 AC010376.1-201ENST00000522101 334 ntBASIC2.21□□□□□ -2.06
MT-ND4P03905 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.21□□□□□ -2.06
MT-ND4P03905 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.21□□□□□ -2.06
MT-ND4P03905 AC079089.3-201ENST00000603094 673 ntBASIC2.21□□□□□ -2.06
MT-ND4P03905 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.21□□□□□ -2.06
MT-ND4P03905 AC013553.2-201ENST00000604244 589 ntBASIC2.21□□□□□ -2.06
MT-ND4P03905 AL161756.2-201ENST00000604597 246 ntBASIC2.21□□□□□ -2.06
MT-ND4P03905 AC004067.1-201ENST00000608733 700 ntBASIC2.21□□□□□ -2.06
MT-ND4P03905 AL138478.1-201ENST00000612252 832 ntBASIC2.21□□□□□ -2.06
MT-ND4P03905 AC002550.2-201ENST00000621246 394 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms