Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AL136964.1-201ENST00000622038 2990 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.04□□□□□ -1.6
VAMP4O75379 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.04□□□□□ -1.6
VAMP4O75379 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
VAMP4O75379 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VAMP4O75379 AC004972.1-201ENST00000623934 2209 ntBASIC5.04□□□□□ -1.6
VAMP4O75379 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
VAMP4O75379 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
VAMP4O75379 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
VAMP4O75379 AC007390.2-201ENST00000606229 3803 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VAMP4O75379 Y_RNA.58-201ENST00000362807 102 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 Y_RNA.154-201ENST00000363624 102 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 SNORD74.4-201ENST00000364129 80 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 RNY3P1-201ENST00000365085 102 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 RNY3-201ENST00000365484 102 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.03□□□□□ -1.6
VAMP4O75379 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.03□□□□□ -1.6
VAMP4O75379 RNU6-39P-201ENST00000384344 107 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 Y_RNA.490-201ENST00000384413 102 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 TXNP7-201ENST00000406296 293 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 RNU6-1148P-201ENST00000410992 104 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 RPS15AP40-201ENST00000419621 391 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.03□□□□□ -1.6
VAMP4O75379 AF228730.4-201ENST00000421457 183 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 AL645937.1-202ENST00000421799 937 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 OR4K11P-201ENST00000431829 904 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 MTCYBP6-201ENST00000441810 138 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 MTND1P18-201ENST00000448191 573 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 MTND3P16-201ENST00000452205 344 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 AL645939.1-201ENST00000453429 797 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.03□□□□□ -1.6
VAMP4O75379 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.03□□□□□ -1.6
VAMP4O75379 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VAMP4O75379 AC026427.2-201ENST00000506228 536 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.03□□□□□ -1.6
VAMP4O75379 RNA5SP154-201ENST00000516193 111 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 RNU2-10P-201ENST00000516375 211 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 SCARNA14-201ENST00000516903 136 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 RNU6-1314P-201ENST00000517139 104 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.03□□□□□ -1.6
VAMP4O75379 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.03□□□□□ -1.6
VAMP4O75379 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.03□□□□□ -1.6
VAMP4O75379 OR4K8P-201ENST00000578842 1048 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 AC025588.3-201ENST00000604182 274 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 RMST_7.1-201ENST00000621935 268 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 FP236240.3-201ENST00000623061 327 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.03□□□□□ -1.6
VAMP4O75379 MIR1302-1-201ENST00000637932 143 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.03□□□□□ -1.6
VAMP4O75379 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.03□□□□□ -1.6
VAMP4O75379 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VAMP4O75379 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VAMP4O75379 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
VAMP4O75379 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
VAMP4O75379 SAGE2P-201ENST00000420011 2126 ntBASIC5.03□□□□□ -1.6
VAMP4O75379 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VAMP4O75379 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
VAMP4O75379 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VAMP4O75379 ASNSP3-201ENST00000451989 1306 ntBASIC5.02□□□□□ -1.61
VAMP4O75379 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
VAMP4O75379 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VAMP4O75379 RNVU1-3-201ENST00000364313 161 ntBASIC5.02□□□□□ -1.61
VAMP4O75379 Y_RNA.231-201ENST00000364358 102 ntBASIC5.02□□□□□ -1.61
VAMP4O75379 U3.15-201ENST00000365398 212 ntBASIC5.02□□□□□ -1.61
VAMP4O75379 SNORA57.1-201ENST00000391227 145 ntBASIC5.02□□□□□ -1.61
VAMP4O75379 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.02□□□□□ -1.61
VAMP4O75379 AL356967.1-201ENST00000406305 431 ntBASIC5.02□□□□□ -1.61
VAMP4O75379 MTCYBP8-201ENST00000422855 651 ntBASIC5.02□□□□□ -1.61
VAMP4O75379 ERLEC1P1-201ENST00000433806 578 ntBASIC5.02□□□□□ -1.61
VAMP4O75379 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.02□□□□□ -1.61
VAMP4O75379 RANP8-201ENST00000444720 713 ntBASIC5.02□□□□□ -1.61
VAMP4O75379 RPS17P13-201ENST00000448974 407 ntBASIC5.02□□□□□ -1.61
VAMP4O75379 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.02□□□□□ -1.61
VAMP4O75379 RNU7-59P-201ENST00000459101 61 ntBASIC5.02□□□□□ -1.61
VAMP4O75379 RNU6-329P-201ENST00000459618 107 ntBASIC5.02□□□□□ -1.61
VAMP4O75379 AC091885.1-201ENST00000506658 268 ntBASIC5.02□□□□□ -1.61
VAMP4O75379 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC5.02□□□□□ -1.61
VAMP4O75379 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.02□□□□□ -1.61
VAMP4O75379 RN7SKP219-201ENST00000516825 296 ntBASIC5.02□□□□□ -1.61
VAMP4O75379 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.02□□□□□ -1.61
VAMP4O75379 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.02□□□□□ -1.61
VAMP4O75379 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.02□□□□□ -1.61
VAMP4O75379 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.02□□□□□ -1.61
VAMP4O75379 AC021646.1-201ENST00000605469 484 ntBASIC5.02□□□□□ -1.61
VAMP4O75379 RNU6-89P-201ENST00000606519 100 ntBASIC5.02□□□□□ -1.61
VAMP4O75379 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC5.02□□□□□ -1.61
VAMP4O75379 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VAMP4O75379 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.02□□□□□ -1.61
VAMP4O75379 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VAMP4O75379 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
VAMP4O75379 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
VAMP4O75379 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
VAMP4O75379 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VAMP4O75379 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VAMP4O75379 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.01□□□□□ -1.61
VAMP4O75379 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VAMP4O75379 AL139276.1-201ENST00000311910 1001 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 RNU6-511P-201ENST00000363496 107 ntBASIC5.01□□□□□ -1.61
VAMP4O75379 Y_RNA.162-201ENST00000363683 102 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms