Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.6□□□□□ -1.83
LDB2O43679 MIR4738-201ENST00000579134 87 ntBASIC3.6□□□□□ -1.83
LDB2O43679 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.6□□□□□ -1.83
LDB2O43679 KC877982.1-201ENST00000602313 470 ntBASIC3.6□□□□□ -1.83
LDB2O43679 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.6□□□□□ -1.83
LDB2O43679 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
LDB2O43679 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LDB2O43679 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LDB2O43679 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.6□□□□□ -1.83
LDB2O43679 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.6□□□□□ -1.83
LDB2O43679 AC004520.1-201ENST00000608362 1413 ntBASIC3.6□□□□□ -1.83
LDB2O43679 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.6□□□□□ -1.83
LDB2O43679 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LDB2O43679 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.59□□□□□ -1.83
LDB2O43679 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LDB2O43679 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LDB2O43679 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LDB2O43679 OR5J1P-201ENST00000313544 939 ntBASIC3.59□□□□□ -1.83
LDB2O43679 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
LDB2O43679 SNORD9-201ENST00000362566 104 ntBASIC3.59□□□□□ -1.83
LDB2O43679 RNU6-263P-201ENST00000363811 107 ntBASIC3.59□□□□□ -1.83
LDB2O43679 RNU5A-8P-201ENST00000364102 114 ntBASIC3.59□□□□□ -1.83
LDB2O43679 RNA5SP167-201ENST00000365461 116 ntBASIC3.59□□□□□ -1.83
LDB2O43679 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.59□□□□□ -1.83
LDB2O43679 SNORA20.2-201ENST00000383922 131 ntBASIC3.59□□□□□ -1.83
LDB2O43679 MIR19A-201ENST00000384878 82 ntBASIC3.59□□□□□ -1.83
LDB2O43679 MIR7-3-201ENST00000384898 110 ntBASIC3.59□□□□□ -1.83
LDB2O43679 AC022028.1-201ENST00000412054 408 ntBASIC3.59□□□□□ -1.83
LDB2O43679 AMD1P2-201ENST00000412936 992 ntBASIC3.59□□□□□ -1.83
LDB2O43679 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.59□□□□□ -1.83
LDB2O43679 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.59□□□□□ -1.83
LDB2O43679 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
LDB2O43679 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.59□□□□□ -1.83
LDB2O43679 AC091286.1-201ENST00000431233 461 ntBASIC3.59□□□□□ -1.83
LDB2O43679 TIMM9P1-201ENST00000436122 256 ntBASIC3.59□□□□□ -1.83
LDB2O43679 RAC1P7-201ENST00000445367 377 ntBASIC3.59□□□□□ -1.83
LDB2O43679 RPS29P31-201ENST00000446147 164 ntBASIC3.59□□□□□ -1.83
LDB2O43679 RPS3AP46-201ENST00000448352 682 ntBASIC3.59□□□□□ -1.83
LDB2O43679 ANP32BP2-201ENST00000454525 545 ntBASIC3.59□□□□□ -1.83
LDB2O43679 AC023194.1-201ENST00000493084 308 ntBASIC3.59□□□□□ -1.83
LDB2O43679 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.59□□□□□ -1.83
LDB2O43679 RNU6-528P-201ENST00000516926 100 ntBASIC3.59□□□□□ -1.83
LDB2O43679 OR5AQ1P-201ENST00000527596 927 ntBASIC3.59□□□□□ -1.83
LDB2O43679 RPS3AP4-201ENST00000555161 764 ntBASIC3.59□□□□□ -1.83
LDB2O43679 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.59□□□□□ -1.83
LDB2O43679 HMGB1P33-201ENST00000563485 527 ntBASIC3.59□□□□□ -1.83
LDB2O43679 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.59□□□□□ -1.83
LDB2O43679 MTCO3P24-201ENST00000572729 782 ntBASIC3.59□□□□□ -1.83
LDB2O43679 MIR3167-201ENST00000579623 85 ntBASIC3.59□□□□□ -1.83
LDB2O43679 MIR4644-201ENST00000579929 84 ntBASIC3.59□□□□□ -1.83
LDB2O43679 COX6CP3-201ENST00000580869 223 ntBASIC3.59□□□□□ -1.83
LDB2O43679 MIR3944-201ENST00000581277 108 ntBASIC3.59□□□□□ -1.83
LDB2O43679 AC006504.3-201ENST00000586818 523 ntBASIC3.59□□□□□ -1.83
LDB2O43679 AL391646.1-201ENST00000603860 190 ntBASIC3.59□□□□□ -1.83
LDB2O43679 AC110741.2-201ENST00000605278 268 ntBASIC3.59□□□□□ -1.83
LDB2O43679 uc_338.12-201ENST00000616344 181 ntBASIC3.59□□□□□ -1.83
LDB2O43679 AC112204.3-201ENST00000623822 332 ntBASIC3.59□□□□□ -1.83
LDB2O43679 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.59□□□□□ -1.83
LDB2O43679 MIR3688-2-201ENST00000636963 87 ntBASIC3.59□□□□□ -1.83
LDB2O43679 AL138713.1-201ENST00000624026 2130 ntBASIC3.59□□□□□ -1.84
LDB2O43679 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.59□□□□□ -1.84
LDB2O43679 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.58□□□□□ -1.84
LDB2O43679 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
LDB2O43679 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LDB2O43679 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.58□□□□□ -1.84
LDB2O43679 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.58□□□□□ -1.84
LDB2O43679 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.58□□□□□ -1.84
LDB2O43679 Y_RNA.256-201ENST00000364594 104 ntBASIC3.58□□□□□ -1.84
LDB2O43679 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
LDB2O43679 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.58□□□□□ -1.84
LDB2O43679 MIR1277-201ENST00000408536 78 ntBASIC3.58□□□□□ -1.84
LDB2O43679 Y_RNA.604-201ENST00000410574 102 ntBASIC3.58□□□□□ -1.84
LDB2O43679 RPS15AP12-201ENST00000419498 388 ntBASIC3.58□□□□□ -1.84
LDB2O43679 MTCO2P19-201ENST00000427513 598 ntBASIC3.58□□□□□ -1.84
LDB2O43679 AC137499.1-201ENST00000427602 88 ntBASIC3.58□□□□□ -1.84
LDB2O43679 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.58□□□□□ -1.84
LDB2O43679 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.58□□□□□ -1.84
LDB2O43679 TPT1P14-201ENST00000448018 505 ntBASIC3.58□□□□□ -1.84
LDB2O43679 MTND2P24-201ENST00000453434 806 ntBASIC3.58□□□□□ -1.84
LDB2O43679 RPL7P49-201ENST00000471402 708 ntBASIC3.58□□□□□ -1.84
LDB2O43679 RNA5SP309-201ENST00000516670 106 ntBASIC3.58□□□□□ -1.84
LDB2O43679 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.58□□□□□ -1.84
LDB2O43679 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.58□□□□□ -1.84
LDB2O43679 OR4R3P-201ENST00000525084 838 ntBASIC3.58□□□□□ -1.84
LDB2O43679 AP003072.2-201ENST00000527756 676 ntBASIC3.58□□□□□ -1.84
LDB2O43679 AP003034.1-201ENST00000534621 422 ntBASIC3.58□□□□□ -1.84
LDB2O43679 CR383656.7-201ENST00000548164 174 ntBASIC3.58□□□□□ -1.84
LDB2O43679 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.58□□□□□ -1.84
LDB2O43679 AC068135.2-201ENST00000569293 1028 ntBASIC3.58□□□□□ -1.84
LDB2O43679 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.58□□□□□ -1.84
LDB2O43679 AP002360.4-201ENST00000606980 481 ntBASIC3.58□□□□□ -1.84
LDB2O43679 AL356585.4-201ENST00000623078 1229 ntBASIC3.58□□□□□ -1.84
LDB2O43679 AC006065.5-201ENST00000623427 349 ntBASIC3.58□□□□□ -1.84
LDB2O43679 AP001486.2-201ENST00000561652 5113 ntBASIC3.58□□□□□ -1.84
LDB2O43679 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LDB2O43679 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.58□□□□□ -1.84
LDB2O43679 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LDB2O43679 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.58□□□□□ -1.84
LDB2O43679 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LDB2O43679 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms