Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.72□□□□□ -2.13
HMGB3O15347 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.72□□□□□ -2.13
HMGB3O15347 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HMGB3O15347 UBTFL10-201ENST00000528532 562 ntBASIC1.72□□□□□ -2.13
HMGB3O15347 CR383656.7-201ENST00000548164 174 ntBASIC1.72□□□□□ -2.13
HMGB3O15347 AL391261.3-201ENST00000557194 520 ntBASIC1.72□□□□□ -2.13
HMGB3O15347 AC087465.1-201ENST00000560574 245 ntBASIC1.72□□□□□ -2.13
HMGB3O15347 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.72□□□□□ -2.13
HMGB3O15347 MIR4448-201ENST00000584360 86 ntBASIC1.72□□□□□ -2.13
HMGB3O15347 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.72□□□□□ -2.13
HMGB3O15347 AC103810.6-201ENST00000606708 136 ntBASIC1.72□□□□□ -2.13
HMGB3O15347 AC009159.1-201ENST00000618386 642 ntBASIC1.72□□□□□ -2.13
HMGB3O15347 AC020763.5-201ENST00000623298 430 ntBASIC1.72□□□□□ -2.13
HMGB3O15347 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMGB3O15347 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
HMGB3O15347 MTCO1P23-201ENST00000415223 1526 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGB3O15347 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.71□□□□□ -2.14
HMGB3O15347 RNU6-115P-201ENST00000364310 107 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 MIR196B-201ENST00000384852 84 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 AL589655.1-201ENST00000405398 482 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 RNA5SP80-201ENST00000410475 111 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 AC092047.1-201ENST00000424997 240 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGB3O15347 AL590383.1-201ENST00000428602 75 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 AC005345.1-201ENST00000431868 217 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGB3O15347 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGB3O15347 Z80107.1-201ENST00000436830 412 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 DDX3P2-201ENST00000446138 111 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGB3O15347 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGB3O15347 DYNLL1P5-201ENST00000467158 270 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 S100A11P2-201ENST00000467589 312 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGB3O15347 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.71□□□□□ -2.14
HMGB3O15347 AC103783.1-201ENST00000520506 373 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGB3O15347 FAM92A1P1-201ENST00000528023 890 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 AC113192.3-201ENST00000529152 742 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 AP005435.4-201ENST00000529514 284 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.71□□□□□ -2.14
HMGB3O15347 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGB3O15347 AL022067.1-201ENST00000602426 454 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 AP001033.2-201ENST00000609701 1003 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HMGB3O15347 SDR42E1P2-201ENST00000614861 481 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 SDR42E1P4-201ENST00000620894 481 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.71□□□□□ -2.14
HMGB3O15347 AC068057.2-201ENST00000624047 895 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 AC093591.3-201ENST00000634516 308 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 AC092881.1-201ENST00000638218 2733 ntBASIC1.71□□□□□ -2.14
HMGB3O15347 AC007785.2-201ENST00000598627 1916 ntBASIC1.7□□□□□ -2.14
HMGB3O15347 SNORD51.1-201ENST00000365405 77 ntBASIC1.7□□□□□ -2.14
HMGB3O15347 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGB3O15347 FCF1P2-201ENST00000415284 583 ntBASIC1.7□□□□□ -2.14
HMGB3O15347 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGB3O15347 MTND4P24-201ENST00000424002 397 ntBASIC1.7□□□□□ -2.14
HMGB3O15347 AC092170.1-201ENST00000440211 356 ntBASIC1.7□□□□□ -2.14
HMGB3O15347 AL591719.1-201ENST00000444669 744 ntBASIC1.7□□□□□ -2.14
HMGB3O15347 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGB3O15347 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.7□□□□□ -2.14
HMGB3O15347 AC092757.1-201ENST00000467293 467 ntBASIC1.7□□□□□ -2.14
HMGB3O15347 AC055731.1-201ENST00000474387 401 ntBASIC1.7□□□□□ -2.14
HMGB3O15347 AC072039.1-201ENST00000477611 581 ntBASIC1.7□□□□□ -2.14
HMGB3O15347 AC017007.3-201ENST00000479865 435 ntBASIC1.7□□□□□ -2.14
HMGB3O15347 RN7SL274P-201ENST00000492268 272 ntBASIC1.7□□□□□ -2.14
HMGB3O15347 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGB3O15347 AC022483.1-201ENST00000514020 567 ntBASIC1.7□□□□□ -2.14
HMGB3O15347 AC022447.1-201ENST00000515358 464 ntBASIC1.7□□□□□ -2.14
HMGB3O15347 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMGB3O15347 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGB3O15347 SULT1C2P1-202ENST00000562418 459 ntBASIC1.7□□□□□ -2.14
HMGB3O15347 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.7□□□□□ -2.14
HMGB3O15347 MIR5002-201ENST00000584713 97 ntBASIC1.7□□□□□ -2.14
HMGB3O15347 HMGN2P15-201ENST00000585707 270 ntBASIC1.7□□□□□ -2.14
HMGB3O15347 AL451007.1-201ENST00000595491 289 ntBASIC1.7□□□□□ -2.14
HMGB3O15347 AC025165.5-201ENST00000602802 578 ntBASIC1.7□□□□□ -2.14
HMGB3O15347 AL031176.1-201ENST00000604554 466 ntBASIC1.7□□□□□ -2.14
HMGB3O15347 OR2AS2P-201ENST00000606902 342 ntBASIC1.7□□□□□ -2.14
HMGB3O15347 AL355802.4-201ENST00000607635 548 ntBASIC1.7□□□□□ -2.14
HMGB3O15347 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMGB3O15347 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMGB3O15347 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.7□□□□□ -2.14
HMGB3O15347 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.69□□□□□ -2.14
HMGB3O15347 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
HMGB3O15347 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
HMGB3O15347 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HMGB3O15347 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HMGB3O15347 MIR221-201ENST00000385135 110 ntBASIC1.69□□□□□ -2.14
HMGB3O15347 AC016769.3-201ENST00000396562 315 ntBASIC1.69□□□□□ -2.14
HMGB3O15347 SUMO2P12-201ENST00000405924 140 ntBASIC1.69□□□□□ -2.14
HMGB3O15347 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.69□□□□□ -2.14
HMGB3O15347 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.69□□□□□ -2.14
HMGB3O15347 AL109913.1-201ENST00000421173 514 ntBASIC1.69□□□□□ -2.14
HMGB3O15347 AL139413.1-201ENST00000421309 217 ntBASIC1.69□□□□□ -2.14
HMGB3O15347 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGB3O15347 MICF-203ENST00000432679 129 ntBASIC1.69□□□□□ -2.14
HMGB3O15347 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.69□□□□□ -2.14
HMGB3O15347 AL049734.2-201ENST00000441066 616 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms