Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 RPL18AP17-201ENST00000455326 198 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 AC026410.2-201ENST00000460281 156 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 AC104472.2-201ENST00000469035 601 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 RPL27AP5-201ENST00000469428 449 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 RPS29P26-201ENST00000477483 171 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 RNU6-232P-201ENST00000517144 64 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 AC012435.1-202ENST00000568772 240 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 AC005951.1-201ENST00000576706 485 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 OR4K7P-201ENST00000580232 945 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 VN1R92P-201ENST00000598511 928 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 OR2AS2P-201ENST00000606902 342 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 TUG1_1.1-201ENST00000610654 145 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 AC004009.2-201ENST00000623016 728 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 AP003122.6-201ENST00000623831 495 ntBASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
TRIM49BA6NDI0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TRIM49BA6NDI0 AC093908.1-201ENST00000623125 8092 ntBASIC3.15□□□□□ -1.9
TRIM49BA6NDI0 AC011460.1-201ENST00000636268 1834 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 RNU6-433P-201ENST00000363216 104 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 SNORA14A-201ENST00000364773 135 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 SNORD116-1-201ENST00000384335 95 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 MIR512-1-201ENST00000384913 84 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 AL049545.1-201ENST00000401856 572 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 AL356131.1-201ENST00000405826 414 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 TRIAP1P1-201ENST00000427062 225 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 AL390023.1-201ENST00000428836 262 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 MTND1P20-201ENST00000430341 950 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 HSPE1P28-201ENST00000443139 211 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 MTND2P4-201ENST00000445034 1004 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 RAC1P7-201ENST00000445367 377 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 MTCO3P11-201ENST00000455103 774 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 RPS15AP17-201ENST00000470598 390 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 AC093281.2-201ENST00000510153 597 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 MTCYBP43-201ENST00000513621 740 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 Y_RNA.688-201ENST00000516565 95 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 AL512347.1-201ENST00000566420 503 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 MTCO3P24-201ENST00000572729 782 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 AC080013.6-201ENST00000606185 215 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 AC090115.4-201ENST00000609970 188 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 AL138880.2-201ENST00000616214 239 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 AC079248.2-201ENST00000623779 326 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 AC084035.1-201ENST00000634543 607 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 AC108206.1-201ENST00000570186 4159 ntBASIC3.15□□□□□ -1.91
TRIM49BA6NDI0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 MIR422A-201ENST00000362286 90 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 RNU6-216P-201ENST00000363282 104 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 RNU6-931P-201ENST00000363850 107 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 DHFRP6-201ENST00000401776 268 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 AC090960.1-201ENST00000421072 306 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 YWHAZP7-201ENST00000436906 631 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 LARP1BP3-201ENST00000437229 869 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 AC112653.1-201ENST00000443851 386 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 MTCO2P25-201ENST00000447065 681 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 RSL24D1P3-201ENST00000449255 495 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 AC003982.1-202ENST00000469928 248 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 BZW1P2-201ENST00000473537 826 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 GMPSP1-201ENST00000514075 579 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 AC060788.1-201ENST00000521318 469 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 OR5AK1P-201ENST00000524837 922 ntBASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM49BA6NDI0 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms