Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Upk1bQ9Z2C6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Upk1bQ9Z2C6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1bQ9Z2C6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1bQ9Z2C6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1bQ9Z2C6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Upk1bQ9Z2C6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.15■□□□□ 0.02
Upk1bQ9Z2C6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Upk1bQ9Z2C6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1bQ9Z2C6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Asic1-205ENSMUST00000228185 1818 ntBASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.14■□□□□ 0.01
Upk1bQ9Z2C6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1bQ9Z2C6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Upk1bQ9Z2C6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1bQ9Z2C6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.13■□□□□ 0.01
Upk1bQ9Z2C6 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1bQ9Z2C6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1bQ9Z2C6 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1bQ9Z2C6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1bQ9Z2C6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Upk1bQ9Z2C6 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Upk1bQ9Z2C6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1bQ9Z2C6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1bQ9Z2C6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.13■□□□□ 0.01
Upk1bQ9Z2C6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Upk1bQ9Z2C6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1bQ9Z2C6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1bQ9Z2C6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1bQ9Z2C6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1bQ9Z2C6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1bQ9Z2C6 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1bQ9Z2C6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1bQ9Z2C6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1bQ9Z2C6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1bQ9Z2C6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.11■□□□□ 0.01
Upk1bQ9Z2C6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1bQ9Z2C6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1bQ9Z2C6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1bQ9Z2C6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1bQ9Z2C6 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1bQ9Z2C6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1bQ9Z2C6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1bQ9Z2C6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1bQ9Z2C6 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.11■□□□□ 0.01
Upk1bQ9Z2C6 Gm12085-201ENSMUST00000119263 940 ntBASIC15.11■□□□□ 0.01
Upk1bQ9Z2C6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1bQ9Z2C6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.11■□□□□ 0.01
Upk1bQ9Z2C6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.11■□□□□ 0.01
Upk1bQ9Z2C6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.11■□□□□ 0.01
Upk1bQ9Z2C6 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.11■□□□□ 0.01
Upk1bQ9Z2C6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Upk1bQ9Z2C6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms