Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcb1Q9Z0H3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcb1Q9Z0H3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Smarcb1Q9Z0H3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Smarcb1Q9Z0H3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcb1Q9Z0H3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcb1Q9Z0H3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Gm44357-201ENSMUST00000195897 142 ntBASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Gm19658-201ENSMUST00000196231 138 ntBASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Gm44367-201ENSMUST00000196836 138 ntBASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Gm44350-201ENSMUST00000197197 138 ntBASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Gm44390-201ENSMUST00000197533 144 ntBASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Gm44313-201ENSMUST00000198018 138 ntBASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Gm44486-201ENSMUST00000198508 138 ntBASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Gm44314-201ENSMUST00000199263 138 ntBASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Gm44394-201ENSMUST00000199558 138 ntBASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Gm44484-201ENSMUST00000199873 138 ntBASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Gm44466-201ENSMUST00000200264 138 ntBASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Gm44359-201ENSMUST00000200671 138 ntBASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcb1Q9Z0H3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Smarcb1Q9Z0H3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcb1Q9Z0H3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcb1Q9Z0H3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcb1Q9Z0H3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcb1Q9Z0H3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Smarcb1Q9Z0H3 Gm4535-201ENSMUST00000182274 558 ntBASIC16.83■□□□□ 0.28
Smarcb1Q9Z0H3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.83■□□□□ 0.28
Smarcb1Q9Z0H3 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.83■□□□□ 0.28
Smarcb1Q9Z0H3 Gm8655-201ENSMUST00000221159 852 ntBASIC16.83■□□□□ 0.28
Smarcb1Q9Z0H3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcb1Q9Z0H3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcb1Q9Z0H3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcb1Q9Z0H3 Gm10355-201ENSMUST00000097146 517 ntBASIC16.83■□□□□ 0.28
Smarcb1Q9Z0H3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcb1Q9Z0H3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcb1Q9Z0H3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcb1Q9Z0H3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcb1Q9Z0H3 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.82■□□□□ 0.28
Smarcb1Q9Z0H3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcb1Q9Z0H3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcb1Q9Z0H3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcb1Q9Z0H3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Smarcb1Q9Z0H3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcb1Q9Z0H3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.82■□□□□ 0.28
Smarcb1Q9Z0H3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Smarcb1Q9Z0H3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcb1Q9Z0H3 Gm6443-201ENSMUST00000203599 874 ntBASIC16.82■□□□□ 0.28
Smarcb1Q9Z0H3 Gm7506-201ENSMUST00000207758 815 ntBASIC16.82■□□□□ 0.28
Smarcb1Q9Z0H3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcb1Q9Z0H3 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.82■□□□□ 0.28
Smarcb1Q9Z0H3 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcb1Q9Z0H3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Smarcb1Q9Z0H3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcb1Q9Z0H3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcb1Q9Z0H3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcb1Q9Z0H3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcb1Q9Z0H3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcb1Q9Z0H3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcb1Q9Z0H3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcb1Q9Z0H3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcb1Q9Z0H3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcb1Q9Z0H3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcb1Q9Z0H3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcb1Q9Z0H3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcb1Q9Z0H3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcb1Q9Z0H3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcb1Q9Z0H3 Gm4459-201ENSMUST00000118750 468 ntBASIC16.81■□□□□ 0.28
Smarcb1Q9Z0H3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcb1Q9Z0H3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.81■□□□□ 0.28
Smarcb1Q9Z0H3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcb1Q9Z0H3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcb1Q9Z0H3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcb1Q9Z0H3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcb1Q9Z0H3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcb1Q9Z0H3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcb1Q9Z0H3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcb1Q9Z0H3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcb1Q9Z0H3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcb1Q9Z0H3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcb1Q9Z0H3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcb1Q9Z0H3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcb1Q9Z0H3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcb1Q9Z0H3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms