Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn5Q9WVD4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn5Q9WVD4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn5Q9WVD4 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn5Q9WVD4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.81■□□□□ 0.28
Clcn5Q9WVD4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn5Q9WVD4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn5Q9WVD4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn5Q9WVD4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Psmb5-202ENSMUST00000227257 622 ntBASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn5Q9WVD4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Gm44357-201ENSMUST00000195897 142 ntBASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Gm19658-201ENSMUST00000196231 138 ntBASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Gm44367-201ENSMUST00000196836 138 ntBASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Gm44350-201ENSMUST00000197197 138 ntBASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Gm44390-201ENSMUST00000197533 144 ntBASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Gm44313-201ENSMUST00000198018 138 ntBASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Gm44486-201ENSMUST00000198508 138 ntBASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Gm44454-201ENSMUST00000198541 138 ntBASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Gm44314-201ENSMUST00000199263 138 ntBASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Gm44394-201ENSMUST00000199558 138 ntBASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Gm44484-201ENSMUST00000199873 138 ntBASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Gm44466-201ENSMUST00000200264 138 ntBASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Gm44359-201ENSMUST00000200671 138 ntBASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn5Q9WVD4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Gm23935-201ENSMUST00000102303 57 ntBASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Gm24270-201ENSMUST00000102326 57 ntBASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Gm13186-201ENSMUST00000118031 316 ntBASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Gm24245-201ENSMUST00000157318 57 ntBASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn5Q9WVD4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 606.7 ms