Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ClcnkaQ9WUB7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
ClcnkaQ9WUB7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ClcnkaQ9WUB7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ClcnkaQ9WUB7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ClcnkaQ9WUB7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
ClcnkaQ9WUB7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ClcnkaQ9WUB7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
ClcnkaQ9WUB7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ClcnkaQ9WUB7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ClcnkaQ9WUB7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 Gm44450-201ENSMUST00000199528 114 ntBASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.01□□□□□ -0.01
ClcnkaQ9WUB7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 AC122351.1-201ENSMUST00000220467 126 ntBASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
ClcnkaQ9WUB7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ClcnkaQ9WUB7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ClcnkaQ9WUB7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ClcnkaQ9WUB7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
ClcnkaQ9WUB7 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.99□□□□□ -0.01
ClcnkaQ9WUB7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ClcnkaQ9WUB7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ClcnkaQ9WUB7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ClcnkaQ9WUB7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ClcnkaQ9WUB7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
ClcnkaQ9WUB7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
ClcnkaQ9WUB7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.99□□□□□ -0.01
ClcnkaQ9WUB7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
ClcnkaQ9WUB7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
ClcnkaQ9WUB7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ClcnkaQ9WUB7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ClcnkaQ9WUB7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ClcnkaQ9WUB7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ClcnkaQ9WUB7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ClcnkaQ9WUB7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
ClcnkaQ9WUB7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
ClcnkaQ9WUB7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClcnkaQ9WUB7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClcnkaQ9WUB7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClcnkaQ9WUB7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
ClcnkaQ9WUB7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClcnkaQ9WUB7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClcnkaQ9WUB7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClcnkaQ9WUB7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClcnkaQ9WUB7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClcnkaQ9WUB7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ClcnkaQ9WUB7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ClcnkaQ9WUB7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.98□□□□□ -0.01
ClcnkaQ9WUB7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ClcnkaQ9WUB7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms