Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Gm9013-201ENSMUST00000132939 882 ntBASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Gm6659-201ENSMUST00000174752 547 ntBASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Gm44450-201ENSMUST00000199528 114 ntBASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40aQ9R1C7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40aQ9R1C7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
Prpf40aQ9R1C7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Prpf40aQ9R1C7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.89■□□□□ 0.46
Prpf40aQ9R1C7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Prpf40aQ9R1C7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40aQ9R1C7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.89■□□□□ 0.45
Prpf40aQ9R1C7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40aQ9R1C7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40aQ9R1C7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40aQ9R1C7 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.89■□□□□ 0.45
Prpf40aQ9R1C7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.89■□□□□ 0.45
Prpf40aQ9R1C7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40aQ9R1C7 Gm37722-201ENSMUST00000193757 208 ntBASIC17.89■□□□□ 0.45
Prpf40aQ9R1C7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40aQ9R1C7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.89■□□□□ 0.45
Prpf40aQ9R1C7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40aQ9R1C7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.89■□□□□ 0.45
Prpf40aQ9R1C7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40aQ9R1C7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40aQ9R1C7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40aQ9R1C7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.89■□□□□ 0.45
Prpf40aQ9R1C7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40aQ9R1C7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40aQ9R1C7 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.88■□□□□ 0.45
Prpf40aQ9R1C7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf40aQ9R1C7 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf40aQ9R1C7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms