Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh17Q9R100 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Cdh17Q9R100 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh17Q9R100 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh17Q9R100 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.89■□□□□ 0.13
Cdh17Q9R100 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh17Q9R100 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh17Q9R100 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.89■□□□□ 0.13
Cdh17Q9R100 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh17Q9R100 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh17Q9R100 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Cdh17Q9R100 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh17Q9R100 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh17Q9R100 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh17Q9R100 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh17Q9R100 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh17Q9R100 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh17Q9R100 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cdh17Q9R100 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.88■□□□□ 0.13
Cdh17Q9R100 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh17Q9R100 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.88■□□□□ 0.13
Cdh17Q9R100 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh17Q9R100 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh17Q9R100 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh17Q9R100 Mir1668-201ENSMUST00000184114 107 ntBASIC15.88■□□□□ 0.13
Cdh17Q9R100 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cdh17Q9R100 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh17Q9R100 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh17Q9R100 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh17Q9R100 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh17Q9R100 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh17Q9R100 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh17Q9R100 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.88■□□□□ 0.13
Cdh17Q9R100 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh17Q9R100 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh17Q9R100 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh17Q9R100 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.87■□□□□ 0.13
Cdh17Q9R100 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.87■□□□□ 0.13
Cdh17Q9R100 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh17Q9R100 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh17Q9R100 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdh17Q9R100 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.85■□□□□ 0.13
Cdh17Q9R100 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdh17Q9R100 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms