Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zc3h8Q9JJ48 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zc3h8Q9JJ48 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zc3h8Q9JJ48 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Zc3h8Q9JJ48 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Zc3h8Q9JJ48 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3h8Q9JJ48 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zc3h8Q9JJ48 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zc3h8Q9JJ48 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zc3h8Q9JJ48 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zc3h8Q9JJ48 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zc3h8Q9JJ48 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Gm15372-201ENSMUST00000120729 834 ntBASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Gm12895-201ENSMUST00000122214 226 ntBASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3h8Q9JJ48 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Zc3h8Q9JJ48 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3h8Q9JJ48 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3h8Q9JJ48 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Zc3h8Q9JJ48 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms