Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl28Q9JIL2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl28Q9JIL2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl28Q9JIL2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ccl28Q9JIL2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl28Q9JIL2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl28Q9JIL2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl28Q9JIL2 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.19□□□□□ -0.3
Ccl28Q9JIL2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl28Q9JIL2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ccl28Q9JIL2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl28Q9JIL2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccl28Q9JIL2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Gm21814-202ENSMUST00000203277 873 ntBASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccl28Q9JIL2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 Phf7-203ENSMUST00000226565 1971 ntBASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccl28Q9JIL2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccl28Q9JIL2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl28Q9JIL2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl28Q9JIL2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl28Q9JIL2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl28Q9JIL2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccl28Q9JIL2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl28Q9JIL2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl28Q9JIL2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
Ccl28Q9JIL2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.16□□□□□ -0.3
Ccl28Q9JIL2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.16□□□□□ -0.3
Ccl28Q9JIL2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl28Q9JIL2 Gm5417-201ENSMUST00000079706 384 ntBASIC13.16□□□□□ -0.3
Ccl28Q9JIL2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl28Q9JIL2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ccl28Q9JIL2 Actl10-202ENSMUST00000226583 1501 ntBASIC13.16□□□□□ -0.3
Ccl28Q9JIL2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl28Q9JIL2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Ccl28Q9JIL2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl28Q9JIL2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl28Q9JIL2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl28Q9JIL2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccl28Q9JIL2 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccl28Q9JIL2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl28Q9JIL2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl28Q9JIL2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl28Q9JIL2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl28Q9JIL2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl28Q9JIL2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl28Q9JIL2 Gm13186-201ENSMUST00000118031 316 ntBASIC13.15□□□□□ -0.3
Ccl28Q9JIL2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl28Q9JIL2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccl28Q9JIL2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl28Q9JIL2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl28Q9JIL2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.15□□□□□ -0.3
Ccl28Q9JIL2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl28Q9JIL2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl28Q9JIL2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccl28Q9JIL2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms