Protein–RNA interactions for Protein: Q9ER88

Dap3, 28S ribosomal protein S29, mitochondrial, mousemouse

Known RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dap3Q9ER88 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Dap3Q9ER88 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Dap3Q9ER88 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Dap3Q9ER88 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Dap3Q9ER88 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Dap3Q9ER88 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Dap3Q9ER88 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.01□□□□□ -0.01
Dap3Q9ER88 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.01□□□□□ -0.01
Dap3Q9ER88 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.01□□□□□ -0.01
Dap3Q9ER88 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.01□□□□□ -0.01
Dap3Q9ER88 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.01□□□□□ -0.01
Dap3Q9ER88 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Dap3Q9ER88 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Dap3Q9ER88 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Dap3Q9ER88 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Dap3Q9ER88 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Dap3Q9ER88 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Dap3Q9ER88 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Dap3Q9ER88 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Dap3Q9ER88 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Dap3Q9ER88 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Dap3Q9ER88 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Dap3Q9ER88 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Dap3Q9ER88 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Dap3Q9ER88 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Dap3Q9ER88 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Dap3Q9ER88 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15□□□□□ -0.01
Dap3Q9ER88 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Dap3Q9ER88 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Dap3Q9ER88 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Dap3Q9ER88 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Dap3Q9ER88 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Dap3Q9ER88 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Dap3Q9ER88 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15□□□□□ -0.01
Dap3Q9ER88 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Dap3Q9ER88 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Dap3Q9ER88 Gm9694-201ENSMUST00000193347 1189 ntBASIC15□□□□□ -0.01
Dap3Q9ER88 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15□□□□□ -0.01
Dap3Q9ER88 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15□□□□□ -0.01
Dap3Q9ER88 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Dap3Q9ER88 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15□□□□□ -0.01
Dap3Q9ER88 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15□□□□□ -0.01
Dap3Q9ER88 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Dap3Q9ER88 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Dap3Q9ER88 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Dap3Q9ER88 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Dap3Q9ER88 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Dap3Q9ER88 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Dap3Q9ER88 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15□□□□□ -0.01
Dap3Q9ER88 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15□□□□□ -0.01
Dap3Q9ER88 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Dap3Q9ER88 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Dap3Q9ER88 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Dap3Q9ER88 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Dap3Q9ER88 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Dap3Q9ER88 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Dap3Q9ER88 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.99□□□□□ -0.01
Dap3Q9ER88 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Dap3Q9ER88 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Dap3Q9ER88 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Dap3Q9ER88 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Dap3Q9ER88 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Dap3Q9ER88 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.99□□□□□ -0.01
Dap3Q9ER88 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Dap3Q9ER88 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Dap3Q9ER88 Gm43183-201ENSMUST00000200632 547 ntBASIC14.99□□□□□ -0.01
Dap3Q9ER88 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.99□□□□□ -0.01
Dap3Q9ER88 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Dap3Q9ER88 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Dap3Q9ER88 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Dap3Q9ER88 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Dap3Q9ER88 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
Dap3Q9ER88 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Dap3Q9ER88 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Dap3Q9ER88 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Dap3Q9ER88 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Dap3Q9ER88 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Dap3Q9ER88 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Dap3Q9ER88 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Dap3Q9ER88 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Dap3Q9ER88 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Dap3Q9ER88 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Dap3Q9ER88 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Dap3Q9ER88 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Dap3Q9ER88 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Dap3Q9ER88 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
Dap3Q9ER88 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Dap3Q9ER88 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.98□□□□□ -0.01
Dap3Q9ER88 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Dap3Q9ER88 Gm12527-201ENSMUST00000117967 564 ntBASIC14.98□□□□□ -0.01
Dap3Q9ER88 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Dap3Q9ER88 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Dap3Q9ER88 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Dap3Q9ER88 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Dap3Q9ER88 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.98□□□□□ -0.01
Dap3Q9ER88 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Dap3Q9ER88 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Dap3Q9ER88 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Dap3Q9ER88 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Dap3Q9ER88 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms