Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps35Q9EQH3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps35Q9EQH3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps35Q9EQH3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Vps35Q9EQH3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps35Q9EQH3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.33■□□□□ 0.2
Vps35Q9EQH3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps35Q9EQH3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Vps35Q9EQH3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps35Q9EQH3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.33■□□□□ 0.2
Vps35Q9EQH3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Vps35Q9EQH3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps35Q9EQH3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Gm29518-201ENSMUST00000190858 372 ntBASIC16.31■□□□□ 0.2
Vps35Q9EQH3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Vps35Q9EQH3 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.3■□□□□ 0.2
Vps35Q9EQH3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.3■□□□□ 0.2
Vps35Q9EQH3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps35Q9EQH3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps35Q9EQH3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Vps35Q9EQH3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps35Q9EQH3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.3■□□□□ 0.2
Vps35Q9EQH3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps35Q9EQH3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps35Q9EQH3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Vps35Q9EQH3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps35Q9EQH3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps35Q9EQH3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps35Q9EQH3 Gm11950-201ENSMUST00000121615 838 ntBASIC16.3■□□□□ 0.2
Vps35Q9EQH3 Gm17808-201ENSMUST00000200859 894 ntBASIC16.3■□□□□ 0.2
Vps35Q9EQH3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.3■□□□□ 0.2
Vps35Q9EQH3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Vps35Q9EQH3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Vps35Q9EQH3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps35Q9EQH3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Vps35Q9EQH3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps35Q9EQH3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vps35Q9EQH3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Vps35Q9EQH3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.29■□□□□ 0.2
Vps35Q9EQH3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps35Q9EQH3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps35Q9EQH3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps35Q9EQH3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps35Q9EQH3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps35Q9EQH3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps35Q9EQH3 Gm6623-201ENSMUST00000173570 544 ntBASIC16.29■□□□□ 0.2
Vps35Q9EQH3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.29■□□□□ 0.2
Vps35Q9EQH3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps35Q9EQH3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps35Q9EQH3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.29■□□□□ 0.2
Vps35Q9EQH3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps35Q9EQH3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms