Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a3bpQ9EQG9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a3bpQ9EQG9 Gm8587-201ENSMUST00000076538 843 ntBASIC18.68■□□□□ 0.58
Col4a3bpQ9EQG9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a3bpQ9EQG9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Col4a3bpQ9EQG9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Col4a3bpQ9EQG9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Col4a3bpQ9EQG9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Col4a3bpQ9EQG9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a3bpQ9EQG9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a3bpQ9EQG9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.67■□□□□ 0.58
Col4a3bpQ9EQG9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a3bpQ9EQG9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a3bpQ9EQG9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a3bpQ9EQG9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Col4a3bpQ9EQG9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a3bpQ9EQG9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a3bpQ9EQG9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.67■□□□□ 0.58
Col4a3bpQ9EQG9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a3bpQ9EQG9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.67■□□□□ 0.58
Col4a3bpQ9EQG9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a3bpQ9EQG9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a3bpQ9EQG9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a3bpQ9EQG9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Col4a3bpQ9EQG9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a3bpQ9EQG9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a3bpQ9EQG9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a3bpQ9EQG9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a3bpQ9EQG9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a3bpQ9EQG9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a3bpQ9EQG9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Gm18421-201ENSMUST00000204122 625 ntBASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.65■□□□□ 0.58
Col4a3bpQ9EQG9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col4a3bpQ9EQG9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Col4a3bpQ9EQG9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col4a3bpQ9EQG9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Col4a3bpQ9EQG9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
Col4a3bpQ9EQG9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col4a3bpQ9EQG9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a3bpQ9EQG9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a3bpQ9EQG9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a3bpQ9EQG9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a3bpQ9EQG9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.64■□□□□ 0.57
Col4a3bpQ9EQG9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Col4a3bpQ9EQG9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a3bpQ9EQG9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms