Protein–RNA interactions for Protein: Q9D4F8

Tubgcp4, Gamma-tubulin complex component 4, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp4Q9D4F8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp4Q9D4F8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp4Q9D4F8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp4Q9D4F8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp4Q9D4F8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp4Q9D4F8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp4Q9D4F8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp4Q9D4F8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp4Q9D4F8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp4Q9D4F8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp4Q9D4F8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.34■□□□□ 0.37
Tubgcp4Q9D4F8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp4Q9D4F8 Gm12644-201ENSMUST00000119935 606 ntBASIC17.34■□□□□ 0.37
Tubgcp4Q9D4F8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.34■□□□□ 0.37
Tubgcp4Q9D4F8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp4Q9D4F8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.34■□□□□ 0.37
Tubgcp4Q9D4F8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.34■□□□□ 0.37
Tubgcp4Q9D4F8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp4Q9D4F8 Gm44454-201ENSMUST00000198541 138 ntBASIC17.34■□□□□ 0.37
Tubgcp4Q9D4F8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp4Q9D4F8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp4Q9D4F8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp4Q9D4F8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp4Q9D4F8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp4Q9D4F8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp4Q9D4F8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp4Q9D4F8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp4Q9D4F8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp4Q9D4F8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp4Q9D4F8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tubgcp4Q9D4F8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Tubgcp4Q9D4F8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp4Q9D4F8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp4Q9D4F8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp4Q9D4F8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.33■□□□□ 0.36
Tubgcp4Q9D4F8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp4Q9D4F8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp4Q9D4F8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Tubgcp4Q9D4F8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.33■□□□□ 0.36
Tubgcp4Q9D4F8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp4Q9D4F8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp4Q9D4F8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp4Q9D4F8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.33■□□□□ 0.36
Tubgcp4Q9D4F8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.33■□□□□ 0.36
Tubgcp4Q9D4F8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp4Q9D4F8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp4Q9D4F8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 Gm13216-201ENSMUST00000117145 591 ntBASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp4Q9D4F8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp4Q9D4F8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp4Q9D4F8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp4Q9D4F8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Tubgcp4Q9D4F8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp4Q9D4F8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Tubgcp4Q9D4F8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp4Q9D4F8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp4Q9D4F8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp4Q9D4F8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.31■□□□□ 0.36
Tubgcp4Q9D4F8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.31■□□□□ 0.36
Tubgcp4Q9D4F8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.31■□□□□ 0.36
Tubgcp4Q9D4F8 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.31■□□□□ 0.36
Tubgcp4Q9D4F8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp4Q9D4F8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp4Q9D4F8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp4Q9D4F8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp4Q9D4F8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp4Q9D4F8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp4Q9D4F8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tubgcp4Q9D4F8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp4Q9D4F8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp4Q9D4F8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp4Q9D4F8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.3■□□□□ 0.36
Tubgcp4Q9D4F8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp4Q9D4F8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.3■□□□□ 0.36
Tubgcp4Q9D4F8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp4Q9D4F8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubgcp4Q9D4F8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms