Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim42Q9D2H5 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim42Q9D2H5 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim42Q9D2H5 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim42Q9D2H5 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim42Q9D2H5 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.33■□□□□ 0.2
Trim42Q9D2H5 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim42Q9D2H5 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim42Q9D2H5 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim42Q9D2H5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim42Q9D2H5 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim42Q9D2H5 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim42Q9D2H5 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.32■□□□□ 0.2
Trim42Q9D2H5 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.32■□□□□ 0.2
Trim42Q9D2H5 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim42Q9D2H5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim42Q9D2H5 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.32■□□□□ 0.2
Trim42Q9D2H5 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim42Q9D2H5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim42Q9D2H5 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim42Q9D2H5 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim42Q9D2H5 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trim42Q9D2H5 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim42Q9D2H5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trim42Q9D2H5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim42Q9D2H5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim42Q9D2H5 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim42Q9D2H5 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Gm18025-201ENSMUST00000221733 862 ntBASIC16.31■□□□□ 0.2
Trim42Q9D2H5 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Trim42Q9D2H5 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim42Q9D2H5 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim42Q9D2H5 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim42Q9D2H5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim42Q9D2H5 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim42Q9D2H5 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim42Q9D2H5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim42Q9D2H5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim42Q9D2H5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.3■□□□□ 0.2
Trim42Q9D2H5 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim42Q9D2H5 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim42Q9D2H5 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Trim42Q9D2H5 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim42Q9D2H5 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Trim42Q9D2H5 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Gm10517-202ENSMUST00000192970 758 ntBASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms