Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cldnd1Q9CQX5 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cldnd1Q9CQX5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldnd1Q9CQX5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldnd1Q9CQX5 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldnd1Q9CQX5 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldnd1Q9CQX5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.64■□□□□ 0.25
Cldnd1Q9CQX5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldnd1Q9CQX5 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cldnd1Q9CQX5 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldnd1Q9CQX5 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Gm36967-201ENSMUST00000193814 266 ntBASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldnd1Q9CQX5 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cldnd1Q9CQX5 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldnd1Q9CQX5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldnd1Q9CQX5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldnd1Q9CQX5 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.62■□□□□ 0.25
Cldnd1Q9CQX5 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldnd1Q9CQX5 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cldnd1Q9CQX5 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Cldnd1Q9CQX5 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.62■□□□□ 0.25
Cldnd1Q9CQX5 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.62■□□□□ 0.25
Cldnd1Q9CQX5 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldnd1Q9CQX5 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.62■□□□□ 0.25
Cldnd1Q9CQX5 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldnd1Q9CQX5 Gm8396-201ENSMUST00000057361 823 ntBASIC16.62■□□□□ 0.25
Cldnd1Q9CQX5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cldnd1Q9CQX5 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldnd1Q9CQX5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldnd1Q9CQX5 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldnd1Q9CQX5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cldnd1Q9CQX5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldnd1Q9CQX5 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.61■□□□□ 0.25
Cldnd1Q9CQX5 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldnd1Q9CQX5 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cldnd1Q9CQX5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldnd1Q9CQX5 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldnd1Q9CQX5 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cldnd1Q9CQX5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldnd1Q9CQX5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldnd1Q9CQX5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldnd1Q9CQX5 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cldnd1Q9CQX5 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldnd1Q9CQX5 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.61■□□□□ 0.25
Cldnd1Q9CQX5 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cldnd1Q9CQX5 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.61■□□□□ 0.25
Cldnd1Q9CQX5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.61■□□□□ 0.25
Cldnd1Q9CQX5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldnd1Q9CQX5 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldnd1Q9CQX5 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldnd1Q9CQX5 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cldnd1Q9CQX5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldnd1Q9CQX5 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldnd1Q9CQX5 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Gm27300-201ENSMUST00000184085 97 ntBASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Gm27335-201ENSMUST00000184758 97 ntBASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldnd1Q9CQX5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms