Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 Mir8098-201ENSMUST00000184011 137 ntBASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 Gm27867-201ENSMUST00000184778 125 ntBASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm7Q9CQQ8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm7Q9CQQ8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm7Q9CQQ8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm7Q9CQQ8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm7Q9CQQ8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
Lsm7Q9CQQ8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.41■□□□□ 0.22
Lsm7Q9CQQ8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Lsm7Q9CQQ8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm7Q9CQQ8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm7Q9CQQ8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.41■□□□□ 0.22
Lsm7Q9CQQ8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm7Q9CQQ8 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.41■□□□□ 0.22
Lsm7Q9CQQ8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm7Q9CQQ8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm7Q9CQQ8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm7Q9CQQ8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm7Q9CQQ8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm7Q9CQQ8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm7Q9CQQ8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm7Q9CQQ8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm7Q9CQQ8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm7Q9CQQ8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.39■□□□□ 0.21
Lsm7Q9CQQ8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm7Q9CQQ8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm7Q9CQQ8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Lsm7Q9CQQ8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm7Q9CQQ8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm7Q9CQQ8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm7Q9CQQ8 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.39■□□□□ 0.21
Lsm7Q9CQQ8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm7Q9CQQ8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm7Q9CQQ8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm7Q9CQQ8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Lsm7Q9CQQ8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms