Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.82■□□□□ 0.12
Rnf111Q99ML9 Gm43799-201ENSMUST00000201845 579 ntBASIC15.82■□□□□ 0.12
Rnf111Q99ML9 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.82■□□□□ 0.12
Rnf111Q99ML9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf111Q99ML9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf111Q99ML9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.82■□□□□ 0.12
Rnf111Q99ML9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf111Q99ML9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf111Q99ML9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf111Q99ML9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf111Q99ML9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf111Q99ML9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf111Q99ML9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf111Q99ML9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf111Q99ML9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf111Q99ML9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Rnf111Q99ML9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf111Q99ML9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Rnf111Q99ML9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.81■□□□□ 0.12
Rnf111Q99ML9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf111Q99ML9 Gm2274-201ENSMUST00000184539 609 ntBASIC15.81■□□□□ 0.12
Rnf111Q99ML9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf111Q99ML9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf111Q99ML9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf111Q99ML9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf111Q99ML9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf111Q99ML9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rnf111Q99ML9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf111Q99ML9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf111Q99ML9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf111Q99ML9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf111Q99ML9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf111Q99ML9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf111Q99ML9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf111Q99ML9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf111Q99ML9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf111Q99ML9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf111Q99ML9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf111Q99ML9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf111Q99ML9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf111Q99ML9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf111Q99ML9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rnf111Q99ML9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf111Q99ML9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf111Q99ML9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.8■□□□□ 0.12
Rnf111Q99ML9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf111Q99ML9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.8■□□□□ 0.12
Rnf111Q99ML9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rnf111Q99ML9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf111Q99ML9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.8■□□□□ 0.12
Rnf111Q99ML9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf111Q99ML9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rnf111Q99ML9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf111Q99ML9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf111Q99ML9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Rnf111Q99ML9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf111Q99ML9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Gm7889-201ENSMUST00000185591 958 ntBASIC15.79■□□□□ 0.12
Rnf111Q99ML9 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf111Q99ML9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf111Q99ML9 Gm7370-201ENSMUST00000219471 767 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms