Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.24■□□□□ 0.03
Nkx6-1Q99MA9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx6-1Q99MA9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx6-1Q99MA9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx6-1Q99MA9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx6-1Q99MA9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx6-1Q99MA9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx6-1Q99MA9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx6-1Q99MA9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nkx6-1Q99MA9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx6-1Q99MA9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx6-1Q99MA9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx6-1Q99MA9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx6-1Q99MA9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 Gm15920-201ENSMUST00000118998 402 ntBASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx6-1Q99MA9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx6-1Q99MA9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx6-1Q99MA9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx6-1Q99MA9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx6-1Q99MA9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.21■□□□□ 0.03
Nkx6-1Q99MA9 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.21■□□□□ 0.03
Nkx6-1Q99MA9 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx6-1Q99MA9 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.21■□□□□ 0.03
Nkx6-1Q99MA9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.21■□□□□ 0.03
Nkx6-1Q99MA9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx6-1Q99MA9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx6-1Q99MA9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.21■□□□□ 0.03
Nkx6-1Q99MA9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Nkx6-1Q99MA9 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx6-1Q99MA9 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx6-1Q99MA9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Nkx6-1Q99MA9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx6-1Q99MA9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nkx6-1Q99MA9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nkx6-1Q99MA9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.2■□□□□ 0.02
Nkx6-1Q99MA9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx6-1Q99MA9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx6-1Q99MA9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx6-1Q99MA9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx6-1Q99MA9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Nkx6-1Q99MA9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx6-1Q99MA9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.2■□□□□ 0.02
Nkx6-1Q99MA9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.2■□□□□ 0.02
Nkx6-1Q99MA9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx6-1Q99MA9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx6-1Q99MA9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx6-1Q99MA9 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.2■□□□□ 0.02
Nkx6-1Q99MA9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx6-1Q99MA9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx6-1Q99MA9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Nkx6-1Q99MA9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx6-1Q99MA9 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Nkx6-1Q99MA9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.19■□□□□ 0.02
Nkx6-1Q99MA9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms