Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Lysmd3Q99LE3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lysmd3Q99LE3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Gm15372-201ENSMUST00000120729 834 ntBASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lysmd3Q99LE3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 Dancr-204ENSMUST00000132389 2347 ntBASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Lysmd3Q99LE3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lysmd3Q99LE3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lysmd3Q99LE3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lysmd3Q99LE3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lysmd3Q99LE3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lysmd3Q99LE3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lysmd3Q99LE3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lysmd3Q99LE3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lysmd3Q99LE3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.84■□□□□ 0.29
Lysmd3Q99LE3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lysmd3Q99LE3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lysmd3Q99LE3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Lysmd3Q99LE3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lysmd3Q99LE3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lysmd3Q99LE3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lysmd3Q99LE3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lysmd3Q99LE3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lysmd3Q99LE3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lysmd3Q99LE3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms