Protein–RNA interactions for Protein: Q99L02

Pagr1a, PAXIP1-associated glutamate-rich protein 1A, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pagr1aQ99L02 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pagr1aQ99L02 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pagr1aQ99L02 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pagr1aQ99L02 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Pagr1aQ99L02 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Pagr1aQ99L02 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pagr1aQ99L02 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pagr1aQ99L02 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pagr1aQ99L02 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Pagr1aQ99L02 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pagr1aQ99L02 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pagr1aQ99L02 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pagr1aQ99L02 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pagr1aQ99L02 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pagr1aQ99L02 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.8■□□□□ 0.6
Pagr1aQ99L02 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.8■□□□□ 0.6
Pagr1aQ99L02 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.8■□□□□ 0.6
Pagr1aQ99L02 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pagr1aQ99L02 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pagr1aQ99L02 AV026068-213ENSMUST00000223675 1171 ntBASIC18.8■□□□□ 0.6
Pagr1aQ99L02 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.8■□□□□ 0.6
Pagr1aQ99L02 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.8■□□□□ 0.6
Pagr1aQ99L02 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.8■□□□□ 0.6
Pagr1aQ99L02 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pagr1aQ99L02 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pagr1aQ99L02 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pagr1aQ99L02 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.79■□□□□ 0.6
Pagr1aQ99L02 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pagr1aQ99L02 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pagr1aQ99L02 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pagr1aQ99L02 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pagr1aQ99L02 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pagr1aQ99L02 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.79■□□□□ 0.6
Pagr1aQ99L02 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Pagr1aQ99L02 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pagr1aQ99L02 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.79■□□□□ 0.6
Pagr1aQ99L02 Gm27702-201ENSMUST00000184512 56 ntBASIC18.79■□□□□ 0.6
Pagr1aQ99L02 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pagr1aQ99L02 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.79■□□□□ 0.6
Pagr1aQ99L02 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.79■□□□□ 0.6
Pagr1aQ99L02 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pagr1aQ99L02 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pagr1aQ99L02 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Pagr1aQ99L02 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.79■□□□□ 0.6
Pagr1aQ99L02 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pagr1aQ99L02 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pagr1aQ99L02 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Gm11780-201ENSMUST00000136880 516 ntBASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pagr1aQ99L02 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pagr1aQ99L02 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pagr1aQ99L02 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pagr1aQ99L02 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.77■□□□□ 0.6
Pagr1aQ99L02 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pagr1aQ99L02 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pagr1aQ99L02 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Pagr1aQ99L02 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Pagr1aQ99L02 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.77■□□□□ 0.6
Pagr1aQ99L02 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.77■□□□□ 0.6
Pagr1aQ99L02 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pagr1aQ99L02 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pagr1aQ99L02 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pagr1aQ99L02 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pagr1aQ99L02 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pagr1aQ99L02 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pagr1aQ99L02 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pagr1aQ99L02 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pagr1aQ99L02 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pagr1aQ99L02 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pagr1aQ99L02 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Pagr1aQ99L02 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pagr1aQ99L02 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pagr1aQ99L02 Gm8655-201ENSMUST00000221159 852 ntBASIC18.76■□□□□ 0.59
Pagr1aQ99L02 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pagr1aQ99L02 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pagr1aQ99L02 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pagr1aQ99L02 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.76■□□□□ 0.59
Pagr1aQ99L02 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms