Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfc4Q99J62 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Rfc4Q99J62 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfc4Q99J62 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfc4Q99J62 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.74■□□□□ 0.59
Rfc4Q99J62 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfc4Q99J62 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rfc4Q99J62 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.74■□□□□ 0.59
Rfc4Q99J62 Gm14140-201ENSMUST00000119999 995 ntBASIC18.74■□□□□ 0.59
Rfc4Q99J62 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.74■□□□□ 0.59
Rfc4Q99J62 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rfc4Q99J62 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rfc4Q99J62 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Rfc4Q99J62 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfc4Q99J62 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.74■□□□□ 0.59
Rfc4Q99J62 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfc4Q99J62 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfc4Q99J62 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Rfc4Q99J62 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rfc4Q99J62 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rfc4Q99J62 Gm14494-201ENSMUST00000118786 435 ntBASIC18.73■□□□□ 0.59
Rfc4Q99J62 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.73■□□□□ 0.59
Rfc4Q99J62 Gm8655-201ENSMUST00000221159 852 ntBASIC18.73■□□□□ 0.59
Rfc4Q99J62 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfc4Q99J62 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfc4Q99J62 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.73■□□□□ 0.59
Rfc4Q99J62 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.72■□□□□ 0.59
Rfc4Q99J62 Gm11780-201ENSMUST00000136880 516 ntBASIC18.72■□□□□ 0.59
Rfc4Q99J62 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc4Q99J62 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc4Q99J62 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfc4Q99J62 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rfc4Q99J62 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfc4Q99J62 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfc4Q99J62 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfc4Q99J62 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfc4Q99J62 Gm13036-201ENSMUST00000117799 748 ntBASIC18.71■□□□□ 0.59
Rfc4Q99J62 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Rfc4Q99J62 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Rfc4Q99J62 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.71■□□□□ 0.59
Rfc4Q99J62 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Rfc4Q99J62 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.71■□□□□ 0.59
Rfc4Q99J62 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfc4Q99J62 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfc4Q99J62 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.71■□□□□ 0.59
Rfc4Q99J62 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfc4Q99J62 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rfc4Q99J62 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Rfc4Q99J62 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfc4Q99J62 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.7■□□□□ 0.58
Rfc4Q99J62 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.7■□□□□ 0.58
Rfc4Q99J62 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.7■□□□□ 0.58
Rfc4Q99J62 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.7■□□□□ 0.58
Rfc4Q99J62 Gm9727-201ENSMUST00000161387 555 ntBASIC18.7■□□□□ 0.58
Rfc4Q99J62 Gm24513-201ENSMUST00000174964 138 ntBASIC18.7■□□□□ 0.58
Rfc4Q99J62 Gm27628-201ENSMUST00000184911 107 ntBASIC18.7■□□□□ 0.58
Rfc4Q99J62 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.7■□□□□ 0.58
Rfc4Q99J62 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rfc4Q99J62 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfc4Q99J62 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfc4Q99J62 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfc4Q99J62 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.7■□□□□ 0.58
Rfc4Q99J62 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfc4Q99J62 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfc4Q99J62 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rfc4Q99J62 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.7■□□□□ 0.58
Rfc4Q99J62 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfc4Q99J62 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfc4Q99J62 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfc4Q99J62 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfc4Q99J62 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfc4Q99J62 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.69■□□□□ 0.58
Rfc4Q99J62 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfc4Q99J62 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfc4Q99J62 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Rfc4Q99J62 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms