Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3b3Q921M3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3b3Q921M3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sf3b3Q921M3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Sf3b3Q921M3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3b3Q921M3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3b3Q921M3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3b3Q921M3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.53■□□□□ 0.72
Sf3b3Q921M3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3b3Q921M3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC19.53■□□□□ 0.72
Sf3b3Q921M3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC19.53■□□□□ 0.72
Sf3b3Q921M3 Gm2756-201ENSMUST00000195851 400 ntBASIC19.53■□□□□ 0.72
Sf3b3Q921M3 Gm43575-201ENSMUST00000196420 516 ntBASIC19.53■□□□□ 0.72
Sf3b3Q921M3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3b3Q921M3 AC090659.1-201ENSMUST00000224334 768 ntBASIC19.53■□□□□ 0.72
Sf3b3Q921M3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Sf3b3Q921M3 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.53■□□□□ 0.72
Sf3b3Q921M3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3b3Q921M3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3b3Q921M3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3b3Q921M3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3b3Q921M3 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.53■□□□□ 0.72
Sf3b3Q921M3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Sf3b3Q921M3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3b3Q921M3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Sf3b3Q921M3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3b3Q921M3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3b3Q921M3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3b3Q921M3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sf3b3Q921M3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Sf3b3Q921M3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.72
Sf3b3Q921M3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3b3Q921M3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3b3Q921M3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Sf3b3Q921M3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3b3Q921M3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3b3Q921M3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.52■□□□□ 0.72
Sf3b3Q921M3 Gm2308-201ENSMUST00000166539 1004 ntBASIC19.52■□□□□ 0.72
Sf3b3Q921M3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.52■□□□□ 0.72
Sf3b3Q921M3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC19.52■□□□□ 0.72
Sf3b3Q921M3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.52■□□□□ 0.72
Sf3b3Q921M3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3b3Q921M3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC19.52■□□□□ 0.72
Sf3b3Q921M3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sf3b3Q921M3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sf3b3Q921M3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sf3b3Q921M3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Sf3b3Q921M3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sf3b3Q921M3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Sf3b3Q921M3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Gm6736-201ENSMUST00000166583 948 ntBASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sf3b3Q921M3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.5■□□□□ 0.71
Sf3b3Q921M3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3b3Q921M3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3b3Q921M3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3b3Q921M3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3b3Q921M3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3b3Q921M3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3b3Q921M3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC19.5■□□□□ 0.71
Sf3b3Q921M3 Gm10175-201ENSMUST00000086013 645 ntBASIC19.5■□□□□ 0.71
Sf3b3Q921M3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3b3Q921M3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Sf3b3Q921M3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3b3Q921M3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Sf3b3Q921M3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3b3Q921M3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Sf3b3Q921M3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3b3Q921M3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sf3b3Q921M3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3b3Q921M3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3b3Q921M3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3b3Q921M3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3b3Q921M3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3b3Q921M3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms