Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Gm2213-201ENSMUST00000197485 688 ntBASIC18.73■□□□□ 0.59
Smc1bQ920F6 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.73■□□□□ 0.59
Smc1bQ920F6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Gm11594-201ENSMUST00000122313 162 ntBASIC18.72■□□□□ 0.59
Smc1bQ920F6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Dancr-204ENSMUST00000132389 2347 ntBASIC18.72■□□□□ 0.59
Smc1bQ920F6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc1bQ920F6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc1bQ920F6 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc1bQ920F6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.71■□□□□ 0.59
Smc1bQ920F6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc1bQ920F6 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc1bQ920F6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc1bQ920F6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Smc1bQ920F6 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc1bQ920F6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc1bQ920F6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
Smc1bQ920F6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smc1bQ920F6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.71■□□□□ 0.59
Smc1bQ920F6 Gm6376-201ENSMUST00000209407 580 ntBASIC18.71■□□□□ 0.59
Smc1bQ920F6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc1bQ920F6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc1bQ920F6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smc1bQ920F6 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc1bQ920F6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc1bQ920F6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc1bQ920F6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
Smc1bQ920F6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc1bQ920F6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc1bQ920F6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc1bQ920F6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Smc1bQ920F6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.71■□□□□ 0.58
Smc1bQ920F6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc1bQ920F6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Smc1bQ920F6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Smc1bQ920F6 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.7■□□□□ 0.58
Smc1bQ920F6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc1bQ920F6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smc1bQ920F6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smc1bQ920F6 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc1bQ920F6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc1bQ920F6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smc1bQ920F6 Gm7862-201ENSMUST00000121461 292 ntBASIC18.7■□□□□ 0.58
Smc1bQ920F6 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.7■□□□□ 0.58
Smc1bQ920F6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smc1bQ920F6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.7■□□□□ 0.58
Smc1bQ920F6 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.7■□□□□ 0.58
Smc1bQ920F6 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smc1bQ920F6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Smc1bQ920F6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Smc1bQ920F6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc1bQ920F6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc1bQ920F6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Smc1bQ920F6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc1bQ920F6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc1bQ920F6 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc1bQ920F6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc1bQ920F6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc1bQ920F6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc1bQ920F6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc1bQ920F6 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smc1bQ920F6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.69■□□□□ 0.58
Smc1bQ920F6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms