Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb2Q91Y00 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb2Q91Y00 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb2Q91Y00 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb2Q91Y00 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhb2Q91Y00 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb2Q91Y00 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb2Q91Y00 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb2Q91Y00 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhb2Q91Y00 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb2Q91Y00 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb2Q91Y00 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhb2Q91Y00 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb2Q91Y00 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.3■□□□□ 0.36
Pcdhb2Q91Y00 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb2Q91Y00 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb2Q91Y00 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb2Q91Y00 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb2Q91Y00 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb2Q91Y00 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb2Q91Y00 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb2Q91Y00 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb2Q91Y00 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Pcdhb2Q91Y00 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb2Q91Y00 Gm18669-201ENSMUST00000216049 778 ntBASIC17.29■□□□□ 0.36
Pcdhb2Q91Y00 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb2Q91Y00 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb2Q91Y00 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb2Q91Y00 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.29■□□□□ 0.36
Pcdhb2Q91Y00 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb2Q91Y00 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb2Q91Y00 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb2Q91Y00 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb2Q91Y00 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb2Q91Y00 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb2Q91Y00 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb2Q91Y00 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb2Q91Y00 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb2Q91Y00 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb2Q91Y00 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb2Q91Y00 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhb2Q91Y00 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb2Q91Y00 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb2Q91Y00 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb2Q91Y00 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb2Q91Y00 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb2Q91Y00 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb2Q91Y00 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.28■□□□□ 0.36
Pcdhb2Q91Y00 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb2Q91Y00 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb2Q91Y00 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhb2Q91Y00 Gm27357-201ENSMUST00000183754 135 ntBASIC17.28■□□□□ 0.36
Pcdhb2Q91Y00 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb2Q91Y00 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb2Q91Y00 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Pcdhb2Q91Y00 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb2Q91Y00 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb2Q91Y00 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdhb2Q91Y00 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhb2Q91Y00 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb2Q91Y00 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb2Q91Y00 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb2Q91Y00 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhb2Q91Y00 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.27■□□□□ 0.36
Pcdhb2Q91Y00 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdhb2Q91Y00 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhb2Q91Y00 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdhb2Q91Y00 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb2Q91Y00 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb2Q91Y00 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Pcdhb2Q91Y00 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.27■□□□□ 0.35
Pcdhb2Q91Y00 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb2Q91Y00 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb2Q91Y00 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb2Q91Y00 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb2Q91Y00 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhb2Q91Y00 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb2Q91Y00 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb2Q91Y00 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Pcdhb2Q91Y00 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb2Q91Y00 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhb2Q91Y00 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb2Q91Y00 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Pcdhb2Q91Y00 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.26■□□□□ 0.35
Pcdhb2Q91Y00 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.26■□□□□ 0.35
Pcdhb2Q91Y00 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb2Q91Y00 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb2Q91Y00 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb2Q91Y00 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb2Q91Y00 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb2Q91Y00 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb2Q91Y00 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb2Q91Y00 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb2Q91Y00 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb2Q91Y00 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.25■□□□□ 0.35
Pcdhb2Q91Y00 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.25■□□□□ 0.35
Pcdhb2Q91Y00 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb2Q91Y00 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdhb2Q91Y00 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb2Q91Y00 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms