Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb20Q91XZ9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb20Q91XZ9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhb20Q91XZ9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb20Q91XZ9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhb20Q91XZ9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhb20Q91XZ9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb20Q91XZ9 Gm44430-201ENSMUST00000203376 995 ntBASIC15.76■□□□□ 0.11
Pcdhb20Q91XZ9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb20Q91XZ9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb20Q91XZ9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb20Q91XZ9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.76■□□□□ 0.11
Pcdhb20Q91XZ9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb20Q91XZ9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhb20Q91XZ9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhb20Q91XZ9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb20Q91XZ9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb20Q91XZ9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb20Q91XZ9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb20Q91XZ9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb20Q91XZ9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb20Q91XZ9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdhb20Q91XZ9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Pcdhb20Q91XZ9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb20Q91XZ9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb20Q91XZ9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb20Q91XZ9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb20Q91XZ9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb20Q91XZ9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdhb20Q91XZ9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb20Q91XZ9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhb20Q91XZ9 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.75■□□□□ 0.11
Pcdhb20Q91XZ9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhb20Q91XZ9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb20Q91XZ9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhb20Q91XZ9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb20Q91XZ9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb20Q91XZ9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb20Q91XZ9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb20Q91XZ9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb20Q91XZ9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhb20Q91XZ9 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC15.74■□□□□ 0.11
Pcdhb20Q91XZ9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb20Q91XZ9 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.74■□□□□ 0.11
Pcdhb20Q91XZ9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb20Q91XZ9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Pcdhb20Q91XZ9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Pcdhb20Q91XZ9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb20Q91XZ9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.74■□□□□ 0.11
Pcdhb20Q91XZ9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb20Q91XZ9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.74■□□□□ 0.11
Pcdhb20Q91XZ9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.74■□□□□ 0.11
Pcdhb20Q91XZ9 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.74■□□□□ 0.11
Pcdhb20Q91XZ9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb20Q91XZ9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb20Q91XZ9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb20Q91XZ9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb20Q91XZ9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.74■□□□□ 0.11
Pcdhb20Q91XZ9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdhb20Q91XZ9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb20Q91XZ9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 Gm43066-201ENSMUST00000199589 1260 ntBASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 Gm45610-201ENSMUST00000209227 784 ntBASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb20Q91XZ9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhb20Q91XZ9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb20Q91XZ9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb20Q91XZ9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb20Q91XZ9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb20Q91XZ9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.72■□□□□ 0.11
Pcdhb20Q91XZ9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb20Q91XZ9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.72■□□□□ 0.11
Pcdhb20Q91XZ9 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Pcdhb20Q91XZ9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.72■□□□□ 0.11
Pcdhb20Q91XZ9 Gm649-201ENSMUST00000117284 1054 ntBASIC15.72■□□□□ 0.11
Pcdhb20Q91XZ9 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC15.72■□□□□ 0.11
Pcdhb20Q91XZ9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb20Q91XZ9 Gm3344-201ENSMUST00000169610 603 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms