Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhga6Q91XY2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 Mir5126-201ENSMUST00000175513 77 ntBASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 Idnk-204ENSMUST00000226010 1898 ntBASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhga6Q91XY2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 Gm15165-201ENSMUST00000118140 502 ntBASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga6Q91XY2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms