Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lims2Q91XD2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lims2Q91XD2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lims2Q91XD2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.6■□□□□ 0.25
Lims2Q91XD2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lims2Q91XD2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lims2Q91XD2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lims2Q91XD2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.59■□□□□ 0.25
Lims2Q91XD2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lims2Q91XD2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lims2Q91XD2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lims2Q91XD2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.59■□□□□ 0.25
Lims2Q91XD2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.59■□□□□ 0.25
Lims2Q91XD2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.59■□□□□ 0.25
Lims2Q91XD2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.59■□□□□ 0.25
Lims2Q91XD2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lims2Q91XD2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lims2Q91XD2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Lims2Q91XD2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lims2Q91XD2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lims2Q91XD2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lims2Q91XD2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lims2Q91XD2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lims2Q91XD2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lims2Q91XD2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.59■□□□□ 0.25
Lims2Q91XD2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.58■□□□□ 0.25
Lims2Q91XD2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lims2Q91XD2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lims2Q91XD2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Lims2Q91XD2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lims2Q91XD2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lims2Q91XD2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lims2Q91XD2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lims2Q91XD2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lims2Q91XD2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lims2Q91XD2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.58■□□□□ 0.24
Lims2Q91XD2 Gm12497-201ENSMUST00000138778 237 ntBASIC16.58■□□□□ 0.24
Lims2Q91XD2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lims2Q91XD2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.58■□□□□ 0.24
Lims2Q91XD2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.58■□□□□ 0.24
Lims2Q91XD2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.58■□□□□ 0.24
Lims2Q91XD2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Lims2Q91XD2 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.58■□□□□ 0.24
Lims2Q91XD2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.58■□□□□ 0.24
Lims2Q91XD2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lims2Q91XD2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Lims2Q91XD2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Lims2Q91XD2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Lims2Q91XD2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Lims2Q91XD2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Lims2Q91XD2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Lims2Q91XD2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Lims2Q91XD2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lims2Q91XD2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lims2Q91XD2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lims2Q91XD2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lims2Q91XD2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lims2Q91XD2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lims2Q91XD2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.57■□□□□ 0.24
Lims2Q91XD2 Gm44357-201ENSMUST00000195897 142 ntBASIC16.57■□□□□ 0.24
Lims2Q91XD2 Gm19658-201ENSMUST00000196231 138 ntBASIC16.57■□□□□ 0.24
Lims2Q91XD2 Gm44367-201ENSMUST00000196836 138 ntBASIC16.57■□□□□ 0.24
Lims2Q91XD2 Gm44350-201ENSMUST00000197197 138 ntBASIC16.57■□□□□ 0.24
Lims2Q91XD2 Gm44390-201ENSMUST00000197533 144 ntBASIC16.57■□□□□ 0.24
Lims2Q91XD2 Gm44313-201ENSMUST00000198018 138 ntBASIC16.57■□□□□ 0.24
Lims2Q91XD2 Gm44486-201ENSMUST00000198508 138 ntBASIC16.57■□□□□ 0.24
Lims2Q91XD2 Gm44314-201ENSMUST00000199263 138 ntBASIC16.57■□□□□ 0.24
Lims2Q91XD2 Gm44394-201ENSMUST00000199558 138 ntBASIC16.57■□□□□ 0.24
Lims2Q91XD2 Gm44484-201ENSMUST00000199873 138 ntBASIC16.57■□□□□ 0.24
Lims2Q91XD2 Gm44466-201ENSMUST00000200264 138 ntBASIC16.57■□□□□ 0.24
Lims2Q91XD2 Gm44359-201ENSMUST00000200671 138 ntBASIC16.57■□□□□ 0.24
Lims2Q91XD2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lims2Q91XD2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.57■□□□□ 0.24
Lims2Q91XD2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lims2Q91XD2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.57■□□□□ 0.24
Lims2Q91XD2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lims2Q91XD2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Lims2Q91XD2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lims2Q91XD2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Lims2Q91XD2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lims2Q91XD2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lims2Q91XD2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lims2Q91XD2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lims2Q91XD2 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.57■□□□□ 0.24
Lims2Q91XD2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lims2Q91XD2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lims2Q91XD2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lims2Q91XD2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lims2Q91XD2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Lims2Q91XD2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lims2Q91XD2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lims2Q91XD2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lims2Q91XD2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lims2Q91XD2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lims2Q91XD2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lims2Q91XD2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lims2Q91XD2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lims2Q91XD2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lims2Q91XD2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lims2Q91XD2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms