Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Gm11336-201ENSMUST00000118168 334 ntBASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Gm45058-201ENSMUST00000205810 766 ntBASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.66□□□□□ -0.22
H1fooQ8VIK3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
H1fooQ8VIK3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Gm15565-201ENSMUST00000118890 427 ntBASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Mir6982-201ENSMUST00000184354 68 ntBASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Gm44450-201ENSMUST00000199528 114 ntBASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Gm18421-201ENSMUST00000204122 625 ntBASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H1fooQ8VIK3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.23
H1fooQ8VIK3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Mir1668-201ENSMUST00000184114 107 ntBASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Gm10252-201ENSMUST00000209541 832 ntBASIC13.64□□□□□ -0.23
H1fooQ8VIK3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H1fooQ8VIK3 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H1fooQ8VIK3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H1fooQ8VIK3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H1fooQ8VIK3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H1fooQ8VIK3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.63□□□□□ -0.23
H1fooQ8VIK3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H1fooQ8VIK3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H1fooQ8VIK3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H1fooQ8VIK3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H1fooQ8VIK3 Gm26039-201ENSMUST00000158152 144 ntBASIC13.63□□□□□ -0.23
H1fooQ8VIK3 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.63□□□□□ -0.23
H1fooQ8VIK3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H1fooQ8VIK3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.63□□□□□ -0.23
H1fooQ8VIK3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.63□□□□□ -0.23
H1fooQ8VIK3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.63□□□□□ -0.23
H1fooQ8VIK3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
H1fooQ8VIK3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H1fooQ8VIK3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H1fooQ8VIK3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H1fooQ8VIK3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H1fooQ8VIK3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H1fooQ8VIK3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms