Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Gm18195-201ENSMUST00000207604 706 ntBASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Gm7506-201ENSMUST00000207758 815 ntBASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx39aQ8VDW0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx39aQ8VDW0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx39aQ8VDW0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx39aQ8VDW0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx39aQ8VDW0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx39aQ8VDW0 Gm18733-201ENSMUST00000173950 856 ntBASIC18.05■□□□□ 0.48
Ddx39aQ8VDW0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.05■□□□□ 0.48
Ddx39aQ8VDW0 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.05■□□□□ 0.48
Ddx39aQ8VDW0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ddx39aQ8VDW0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx39aQ8VDW0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx39aQ8VDW0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx39aQ8VDW0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx39aQ8VDW0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ddx39aQ8VDW0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx39aQ8VDW0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx39aQ8VDW0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx39aQ8VDW0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx39aQ8VDW0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx39aQ8VDW0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Ddx39aQ8VDW0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.04■□□□□ 0.48
Ddx39aQ8VDW0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx39aQ8VDW0 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.04■□□□□ 0.48
Ddx39aQ8VDW0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx39aQ8VDW0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx39aQ8VDW0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.04■□□□□ 0.48
Ddx39aQ8VDW0 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.04■□□□□ 0.48
Ddx39aQ8VDW0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx39aQ8VDW0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx39aQ8VDW0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx39aQ8VDW0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx39aQ8VDW0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx39aQ8VDW0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ddx39aQ8VDW0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx39aQ8VDW0 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.03■□□□□ 0.48
Ddx39aQ8VDW0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.03■□□□□ 0.48
Ddx39aQ8VDW0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx39aQ8VDW0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx39aQ8VDW0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx39aQ8VDW0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Ddx39aQ8VDW0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx39aQ8VDW0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.03■□□□□ 0.48
Ddx39aQ8VDW0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.03■□□□□ 0.48
Ddx39aQ8VDW0 Gm36967-201ENSMUST00000193814 266 ntBASIC18.03■□□□□ 0.48
Ddx39aQ8VDW0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ddx39aQ8VDW0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.03■□□□□ 0.48
Ddx39aQ8VDW0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.03■□□□□ 0.48
Ddx39aQ8VDW0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx39aQ8VDW0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx39aQ8VDW0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx39aQ8VDW0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx39aQ8VDW0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx39aQ8VDW0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx39aQ8VDW0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Ddx39aQ8VDW0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx39aQ8VDW0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx39aQ8VDW0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.02■□□□□ 0.48
Ddx39aQ8VDW0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Ddx39aQ8VDW0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx39aQ8VDW0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx39aQ8VDW0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx39aQ8VDW0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.02■□□□□ 0.48
Ddx39aQ8VDW0 Gm6443-201ENSMUST00000203599 874 ntBASIC18.02■□□□□ 0.48
Ddx39aQ8VDW0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx39aQ8VDW0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx39aQ8VDW0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx39aQ8VDW0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx39aQ8VDW0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx39aQ8VDW0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx39aQ8VDW0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx39aQ8VDW0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ddx39aQ8VDW0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ddx39aQ8VDW0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ddx39aQ8VDW0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms