Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rprd1aQ8VDS4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.73■□□□□ 0.27
Rprd1aQ8VDS4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rprd1aQ8VDS4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.73■□□□□ 0.27
Rprd1aQ8VDS4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rprd1aQ8VDS4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rprd1aQ8VDS4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rprd1aQ8VDS4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rprd1aQ8VDS4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Rprd1aQ8VDS4 Gm9103-201ENSMUST00000119371 405 ntBASIC16.73■□□□□ 0.27
Rprd1aQ8VDS4 Gm27357-201ENSMUST00000183754 135 ntBASIC16.73■□□□□ 0.27
Rprd1aQ8VDS4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.73■□□□□ 0.27
Rprd1aQ8VDS4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rprd1aQ8VDS4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rprd1aQ8VDS4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rprd1aQ8VDS4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rprd1aQ8VDS4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rprd1aQ8VDS4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rprd1aQ8VDS4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rprd1aQ8VDS4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rprd1aQ8VDS4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rprd1aQ8VDS4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Gm13216-201ENSMUST00000117145 591 ntBASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rprd1aQ8VDS4 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rprd1aQ8VDS4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rprd1aQ8VDS4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rprd1aQ8VDS4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rprd1aQ8VDS4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rprd1aQ8VDS4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.71■□□□□ 0.27
Rprd1aQ8VDS4 Gm18669-201ENSMUST00000216049 778 ntBASIC16.71■□□□□ 0.27
Rprd1aQ8VDS4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.71■□□□□ 0.27
Rprd1aQ8VDS4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rprd1aQ8VDS4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rprd1aQ8VDS4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms