Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf8Q8VC56 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.73■□□□□ 0.11
Rnf8Q8VC56 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf8Q8VC56 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf8Q8VC56 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf8Q8VC56 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf8Q8VC56 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.73■□□□□ 0.11
Rnf8Q8VC56 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf8Q8VC56 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf8Q8VC56 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.73■□□□□ 0.11
Rnf8Q8VC56 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Rnf8Q8VC56 Gm16061-201ENSMUST00000122167 857 ntBASIC15.73■□□□□ 0.11
Rnf8Q8VC56 Gm18958-201ENSMUST00000174258 762 ntBASIC15.73■□□□□ 0.11
Rnf8Q8VC56 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Rnf8Q8VC56 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.73■□□□□ 0.11
Rnf8Q8VC56 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf8Q8VC56 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf8Q8VC56 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Rnf8Q8VC56 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf8Q8VC56 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Rnf8Q8VC56 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf8Q8VC56 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Rnf8Q8VC56 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Rnf8Q8VC56 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf8Q8VC56 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf8Q8VC56 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf8Q8VC56 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf8Q8VC56 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf8Q8VC56 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf8Q8VC56 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
Rnf8Q8VC56 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf8Q8VC56 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf8Q8VC56 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf8Q8VC56 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf8Q8VC56 Gm18959-201ENSMUST00000208954 655 ntBASIC15.72■□□□□ 0.11
Rnf8Q8VC56 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf8Q8VC56 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf8Q8VC56 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Rnf8Q8VC56 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf8Q8VC56 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf8Q8VC56 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf8Q8VC56 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Rnf8Q8VC56 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Gm9987-201ENSMUST00000069768 567 ntBASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf8Q8VC56 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf8Q8VC56 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf8Q8VC56 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf8Q8VC56 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf8Q8VC56 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf8Q8VC56 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf8Q8VC56 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf8Q8VC56 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf8Q8VC56 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf8Q8VC56 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rnf8Q8VC56 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rnf8Q8VC56 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rnf8Q8VC56 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.7■□□□□ 0.1
Rnf8Q8VC56 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rnf8Q8VC56 Gm7889-201ENSMUST00000185591 958 ntBASIC15.7■□□□□ 0.1
Rnf8Q8VC56 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rnf8Q8VC56 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rnf8Q8VC56 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms