Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubqln1Q8R317 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubqln1Q8R317 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubqln1Q8R317 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ubqln1Q8R317 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.44■□□□□ 0.06
Ubqln1Q8R317 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubqln1Q8R317 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ubqln1Q8R317 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubqln1Q8R317 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ubqln1Q8R317 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Ubqln1Q8R317 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.44■□□□□ 0.06
Ubqln1Q8R317 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubqln1Q8R317 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ubqln1Q8R317 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubqln1Q8R317 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubqln1Q8R317 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubqln1Q8R317 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubqln1Q8R317 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubqln1Q8R317 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubqln1Q8R317 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubqln1Q8R317 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubqln1Q8R317 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubqln1Q8R317 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ubqln1Q8R317 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ubqln1Q8R317 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.43■□□□□ 0.06
Ubqln1Q8R317 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Ubqln1Q8R317 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ubqln1Q8R317 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.42■□□□□ 0.06
Ubqln1Q8R317 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ubqln1Q8R317 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ubqln1Q8R317 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ubqln1Q8R317 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Ubqln1Q8R317 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.42■□□□□ 0.06
Ubqln1Q8R317 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.42■□□□□ 0.06
Ubqln1Q8R317 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Ubqln1Q8R317 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ubqln1Q8R317 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ubqln1Q8R317 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ubqln1Q8R317 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ubqln1Q8R317 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ubqln1Q8R317 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ubqln1Q8R317 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ubqln1Q8R317 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ubqln1Q8R317 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ubqln1Q8R317 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Ubqln1Q8R317 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Gm5587-201ENSMUST00000206270 674 ntBASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
Ubqln1Q8R317 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms