Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atf7Q8R0S1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atf7Q8R0S1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atf7Q8R0S1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atf7Q8R0S1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atf7Q8R0S1 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.25■□□□□ 0.67
Atf7Q8R0S1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Atf7Q8R0S1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atf7Q8R0S1 Mir7071-201ENSMUST00000184847 69 ntBASIC19.25■□□□□ 0.67
Atf7Q8R0S1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atf7Q8R0S1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Atf7Q8R0S1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.25■□□□□ 0.67
Atf7Q8R0S1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Atf7Q8R0S1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atf7Q8R0S1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.25■□□□□ 0.67
Atf7Q8R0S1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atf7Q8R0S1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atf7Q8R0S1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Atf7Q8R0S1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Atf7Q8R0S1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atf7Q8R0S1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atf7Q8R0S1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Atf7Q8R0S1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atf7Q8R0S1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atf7Q8R0S1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atf7Q8R0S1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Atf7Q8R0S1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.24■□□□□ 0.67
Atf7Q8R0S1 Gm5587-201ENSMUST00000206270 674 ntBASIC19.24■□□□□ 0.67
Atf7Q8R0S1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Atf7Q8R0S1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atf7Q8R0S1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.24■□□□□ 0.67
Atf7Q8R0S1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Atf7Q8R0S1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atf7Q8R0S1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atf7Q8R0S1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atf7Q8R0S1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atf7Q8R0S1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Atf7Q8R0S1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf7Q8R0S1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.23■□□□□ 0.67
Atf7Q8R0S1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atf7Q8R0S1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf7Q8R0S1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf7Q8R0S1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf7Q8R0S1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Atf7Q8R0S1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Atf7Q8R0S1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf7Q8R0S1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf7Q8R0S1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Atf7Q8R0S1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atf7Q8R0S1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf7Q8R0S1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf7Q8R0S1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf7Q8R0S1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf7Q8R0S1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Atf7Q8R0S1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf7Q8R0S1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf7Q8R0S1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Atf7Q8R0S1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
Atf7Q8R0S1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Atf7Q8R0S1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Atf7Q8R0S1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Atf7Q8R0S1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf7Q8R0S1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf7Q8R0S1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
Atf7Q8R0S1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Atf7Q8R0S1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf7Q8R0S1 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.22■□□□□ 0.67
Atf7Q8R0S1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Atf7Q8R0S1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf7Q8R0S1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf7Q8R0S1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf7Q8R0S1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.21■□□□□ 0.67
Atf7Q8R0S1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf7Q8R0S1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf7Q8R0S1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Atf7Q8R0S1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atf7Q8R0S1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.21■□□□□ 0.67
Atf7Q8R0S1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atf7Q8R0S1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.21■□□□□ 0.67
Atf7Q8R0S1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf7Q8R0S1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf7Q8R0S1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf7Q8R0S1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf7Q8R0S1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf7Q8R0S1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf7Q8R0S1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf7Q8R0S1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf7Q8R0S1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atf7Q8R0S1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Atf7Q8R0S1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf7Q8R0S1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf7Q8R0S1 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Atf7Q8R0S1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf7Q8R0S1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.2■□□□□ 0.66
Atf7Q8R0S1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf7Q8R0S1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atf7Q8R0S1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf7Q8R0S1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf7Q8R0S1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atf7Q8R0S1 Gm10052-201ENSMUST00000168019 960 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms