Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf4Q8K4J2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 Gm5408-201ENSMUST00000197998 747 ntBASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 Gm4974-201ENSMUST00000209974 875 ntBASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 Gm18671-201ENSMUST00000214826 683 ntBASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ebf4Q8K4J2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Gm26524-201ENSMUST00000192339 390 ntBASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ebf4Q8K4J2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ebf4Q8K4J2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms