Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.39■□□□□ 0.05
Clrn1Q8K445 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.39■□□□□ 0.05
Clrn1Q8K445 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn1Q8K445 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Clrn1Q8K445 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Mir770-201ENSMUST00000103252 94 ntBASIC15.38■□□□□ 0.05
Clrn1Q8K445 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Gm6659-201ENSMUST00000174752 547 ntBASIC15.38■□□□□ 0.05
Clrn1Q8K445 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.38■□□□□ 0.05
Clrn1Q8K445 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clrn1Q8K445 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clrn1Q8K445 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clrn1Q8K445 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clrn1Q8K445 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Clrn1Q8K445 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Clrn1Q8K445 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clrn1Q8K445 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clrn1Q8K445 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Clrn1Q8K445 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.37■□□□□ 0.05
Clrn1Q8K445 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Clrn1Q8K445 Gm5587-201ENSMUST00000206270 674 ntBASIC15.37■□□□□ 0.05
Clrn1Q8K445 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clrn1Q8K445 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Clrn1Q8K445 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clrn1Q8K445 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clrn1Q8K445 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Clrn1Q8K445 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clrn1Q8K445 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clrn1Q8K445 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Clrn1Q8K445 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.37■□□□□ 0.05
Clrn1Q8K445 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.37■□□□□ 0.05
Clrn1Q8K445 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Clrn1Q8K445 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Clrn1Q8K445 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.37■□□□□ 0.05
Clrn1Q8K445 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.36■□□□□ 0.05
Clrn1Q8K445 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.36■□□□□ 0.05
Clrn1Q8K445 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.36■□□□□ 0.05
Clrn1Q8K445 Gm6623-201ENSMUST00000173570 544 ntBASIC15.36■□□□□ 0.05
Clrn1Q8K445 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.36■□□□□ 0.05
Clrn1Q8K445 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Clrn1Q8K445 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clrn1Q8K445 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clrn1Q8K445 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clrn1Q8K445 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clrn1Q8K445 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Clrn1Q8K445 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clrn1Q8K445 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms