Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn1Q8K0T0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn1Q8K0T0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn1Q8K0T0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn1Q8K0T0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn1Q8K0T0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn1Q8K0T0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn1Q8K0T0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rtn1Q8K0T0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn1Q8K0T0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn1Q8K0T0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn1Q8K0T0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn1Q8K0T0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn1Q8K0T0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn1Q8K0T0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn1Q8K0T0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn1Q8K0T0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn1Q8K0T0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn1Q8K0T0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.8■□□□□ 0.6
Rtn1Q8K0T0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.8■□□□□ 0.6
Rtn1Q8K0T0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.8■□□□□ 0.6
Rtn1Q8K0T0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn1Q8K0T0 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.8■□□□□ 0.6
Rtn1Q8K0T0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn1Q8K0T0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn1Q8K0T0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Rtn1Q8K0T0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn1Q8K0T0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.8■□□□□ 0.6
Rtn1Q8K0T0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn1Q8K0T0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
Rtn1Q8K0T0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn1Q8K0T0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rtn1Q8K0T0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn1Q8K0T0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rtn1Q8K0T0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn1Q8K0T0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 Gm33142-201ENSMUST00000193913 867 ntBASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.79■□□□□ 0.6
Rtn1Q8K0T0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 Gm15794-201ENSMUST00000120182 631 ntBASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.78■□□□□ 0.6
Rtn1Q8K0T0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn1Q8K0T0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn1Q8K0T0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rtn1Q8K0T0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn1Q8K0T0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn1Q8K0T0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn1Q8K0T0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn1Q8K0T0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.77■□□□□ 0.6
Rtn1Q8K0T0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn1Q8K0T0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
Rtn1Q8K0T0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Rtn1Q8K0T0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn1Q8K0T0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rtn1Q8K0T0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn1Q8K0T0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn1Q8K0T0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn1Q8K0T0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtn1Q8K0T0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms