Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trpm6Q8CIR4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.3■□□□□ 0.2
Trpm6Q8CIR4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm6Q8CIR4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm6Q8CIR4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm6Q8CIR4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm6Q8CIR4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 AV026068-213ENSMUST00000223675 1171 ntBASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Gm14140-201ENSMUST00000119999 995 ntBASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Gm15467-201ENSMUST00000120582 445 ntBASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Mir6404-201ENSMUST00000183699 94 ntBASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Gm8655-201ENSMUST00000221159 852 ntBASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.29■□□□□ 0.2
Trpm6Q8CIR4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Gm12260-201ENSMUST00000122447 411 ntBASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Gm15590-201ENSMUST00000078419 552 ntBASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trpm6Q8CIR4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trpm6Q8CIR4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trpm6Q8CIR4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Trpm6Q8CIR4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trpm6Q8CIR4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.27■□□□□ 0.2
Trpm6Q8CIR4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trpm6Q8CIR4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trpm6Q8CIR4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.27■□□□□ 0.2
Trpm6Q8CIR4 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.27■□□□□ 0.2
Trpm6Q8CIR4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trpm6Q8CIR4 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.27■□□□□ 0.2
Trpm6Q8CIR4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trpm6Q8CIR4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trpm6Q8CIR4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trpm6Q8CIR4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trpm6Q8CIR4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trpm6Q8CIR4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trpm6Q8CIR4 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.27■□□□□ 0.19
Trpm6Q8CIR4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trpm6Q8CIR4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trpm6Q8CIR4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trpm6Q8CIR4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trpm6Q8CIR4 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trpm6Q8CIR4 Gm8000-201ENSMUST00000188378 592 ntBASIC16.26■□□□□ 0.19
Trpm6Q8CIR4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.26■□□□□ 0.19
Trpm6Q8CIR4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trpm6Q8CIR4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trpm6Q8CIR4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trpm6Q8CIR4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trpm6Q8CIR4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trpm6Q8CIR4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trpm6Q8CIR4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trpm6Q8CIR4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Trpm6Q8CIR4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trpm6Q8CIR4 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms