Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syne4Q8CII8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syne4Q8CII8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syne4Q8CII8 Gm11764-201ENSMUST00000120221 623 ntBASIC18.39■□□□□ 0.53
Syne4Q8CII8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.39■□□□□ 0.53
Syne4Q8CII8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Syne4Q8CII8 Gm5682-201ENSMUST00000173402 505 ntBASIC18.39■□□□□ 0.53
Syne4Q8CII8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syne4Q8CII8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.39■□□□□ 0.53
Syne4Q8CII8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Syne4Q8CII8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syne4Q8CII8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syne4Q8CII8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syne4Q8CII8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syne4Q8CII8 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Syne4Q8CII8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syne4Q8CII8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syne4Q8CII8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Syne4Q8CII8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Syne4Q8CII8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Syne4Q8CII8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Syne4Q8CII8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syne4Q8CII8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syne4Q8CII8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syne4Q8CII8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syne4Q8CII8 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.38■□□□□ 0.53
Syne4Q8CII8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Syne4Q8CII8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syne4Q8CII8 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syne4Q8CII8 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.38■□□□□ 0.53
Syne4Q8CII8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syne4Q8CII8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syne4Q8CII8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Syne4Q8CII8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.38■□□□□ 0.53
Syne4Q8CII8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Syne4Q8CII8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syne4Q8CII8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Syne4Q8CII8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syne4Q8CII8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Syne4Q8CII8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syne4Q8CII8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syne4Q8CII8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Syne4Q8CII8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.37■□□□□ 0.53
Syne4Q8CII8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Syne4Q8CII8 Gm15920-201ENSMUST00000118998 402 ntBASIC18.37■□□□□ 0.53
Syne4Q8CII8 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Syne4Q8CII8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.37■□□□□ 0.53
Syne4Q8CII8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.37■□□□□ 0.53
Syne4Q8CII8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syne4Q8CII8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syne4Q8CII8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syne4Q8CII8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Syne4Q8CII8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.37■□□□□ 0.53
Syne4Q8CII8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Syne4Q8CII8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Syne4Q8CII8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syne4Q8CII8 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Syne4Q8CII8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syne4Q8CII8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Syne4Q8CII8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Syne4Q8CII8 Mir6404-201ENSMUST00000183699 94 ntBASIC18.36■□□□□ 0.53
Syne4Q8CII8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syne4Q8CII8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.36■□□□□ 0.53
Syne4Q8CII8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syne4Q8CII8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.36■□□□□ 0.53
Syne4Q8CII8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.36■□□□□ 0.53
Syne4Q8CII8 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.36■□□□□ 0.53
Syne4Q8CII8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syne4Q8CII8 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.36■□□□□ 0.53
Syne4Q8CII8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syne4Q8CII8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syne4Q8CII8 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Syne4Q8CII8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syne4Q8CII8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syne4Q8CII8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Syne4Q8CII8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syne4Q8CII8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Syne4Q8CII8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.36■□□□□ 0.53
Syne4Q8CII8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syne4Q8CII8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syne4Q8CII8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syne4Q8CII8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.35■□□□□ 0.53
Syne4Q8CII8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Syne4Q8CII8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syne4Q8CII8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syne4Q8CII8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syne4Q8CII8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Syne4Q8CII8 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.35■□□□□ 0.53
Syne4Q8CII8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Syne4Q8CII8 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.35■□□□□ 0.53
Syne4Q8CII8 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.35■□□□□ 0.53
Syne4Q8CII8 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.35■□□□□ 0.53
Syne4Q8CII8 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.35■□□□□ 0.53
Syne4Q8CII8 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.35■□□□□ 0.53
Syne4Q8CII8 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.35■□□□□ 0.53
Syne4Q8CII8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.35■□□□□ 0.53
Syne4Q8CII8 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.35■□□□□ 0.53
Syne4Q8CII8 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.35■□□□□ 0.53
Syne4Q8CII8 Gm8825-201ENSMUST00000182565 998 ntBASIC18.35■□□□□ 0.53
Syne4Q8CII8 Gm4518-201ENSMUST00000182638 718 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms