Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Clip4Q8CI96 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clip4Q8CI96 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.44■□□□□ 0.22
Clip4Q8CI96 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clip4Q8CI96 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clip4Q8CI96 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.44■□□□□ 0.22
Clip4Q8CI96 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.44■□□□□ 0.22
Clip4Q8CI96 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.44■□□□□ 0.22
Clip4Q8CI96 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clip4Q8CI96 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clip4Q8CI96 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clip4Q8CI96 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Clip4Q8CI96 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clip4Q8CI96 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clip4Q8CI96 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clip4Q8CI96 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clip4Q8CI96 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clip4Q8CI96 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clip4Q8CI96 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clip4Q8CI96 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Gm23634-201ENSMUST00000175071 91 ntBASIC16.43■□□□□ 0.22
Clip4Q8CI96 Gm27389-201ENSMUST00000183622 195 ntBASIC16.43■□□□□ 0.22
Clip4Q8CI96 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Gm21559-201ENSMUST00000220638 855 ntBASIC16.43■□□□□ 0.22
Clip4Q8CI96 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Gm8587-201ENSMUST00000076538 843 ntBASIC16.43■□□□□ 0.22
Clip4Q8CI96 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clip4Q8CI96 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Clip4Q8CI96 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clip4Q8CI96 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clip4Q8CI96 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clip4Q8CI96 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clip4Q8CI96 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Clip4Q8CI96 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clip4Q8CI96 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Clip4Q8CI96 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Clip4Q8CI96 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clip4Q8CI96 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clip4Q8CI96 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.42■□□□□ 0.22
Clip4Q8CI96 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clip4Q8CI96 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clip4Q8CI96 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clip4Q8CI96 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Clip4Q8CI96 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clip4Q8CI96 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clip4Q8CI96 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.42■□□□□ 0.22
Clip4Q8CI96 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clip4Q8CI96 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clip4Q8CI96 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clip4Q8CI96 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Clip4Q8CI96 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.42■□□□□ 0.22
Clip4Q8CI96 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clip4Q8CI96 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clip4Q8CI96 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clip4Q8CI96 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clip4Q8CI96 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clip4Q8CI96 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clip4Q8CI96 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.41■□□□□ 0.22
Clip4Q8CI96 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clip4Q8CI96 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clip4Q8CI96 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Clip4Q8CI96 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clip4Q8CI96 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clip4Q8CI96 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clip4Q8CI96 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clip4Q8CI96 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clip4Q8CI96 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clip4Q8CI96 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clip4Q8CI96 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clip4Q8CI96 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clip4Q8CI96 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clip4Q8CI96 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Clip4Q8CI96 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clip4Q8CI96 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Clip4Q8CI96 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clip4Q8CI96 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clip4Q8CI96 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms