Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Vps50Q8CI71 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Vps50Q8CI71 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps50Q8CI71 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.03■□□□□ 0.16
Vps50Q8CI71 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Vps50Q8CI71 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.03■□□□□ 0.16
Vps50Q8CI71 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.03■□□□□ 0.16
Vps50Q8CI71 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps50Q8CI71 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Vps50Q8CI71 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.03■□□□□ 0.16
Vps50Q8CI71 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Vps50Q8CI71 Gm27389-201ENSMUST00000183622 195 ntBASIC16.03■□□□□ 0.16
Vps50Q8CI71 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.03■□□□□ 0.16
Vps50Q8CI71 Gm7791-201ENSMUST00000219066 539 ntBASIC16.03■□□□□ 0.16
Vps50Q8CI71 Gm18032-201ENSMUST00000222541 538 ntBASIC16.03■□□□□ 0.16
Vps50Q8CI71 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps50Q8CI71 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps50Q8CI71 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Vps50Q8CI71 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps50Q8CI71 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps50Q8CI71 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps50Q8CI71 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps50Q8CI71 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps50Q8CI71 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.03■□□□□ 0.16
Vps50Q8CI71 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps50Q8CI71 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.03■□□□□ 0.16
Vps50Q8CI71 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Vps50Q8CI71 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps50Q8CI71 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps50Q8CI71 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps50Q8CI71 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps50Q8CI71 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Vps50Q8CI71 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.02■□□□□ 0.16
Vps50Q8CI71 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps50Q8CI71 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps50Q8CI71 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps50Q8CI71 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Vps50Q8CI71 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.02■□□□□ 0.16
Vps50Q8CI71 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps50Q8CI71 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vps50Q8CI71 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Vps50Q8CI71 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vps50Q8CI71 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.02■□□□□ 0.15
Vps50Q8CI71 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vps50Q8CI71 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vps50Q8CI71 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.02■□□□□ 0.15
Vps50Q8CI71 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vps50Q8CI71 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Gm25016-201ENSMUST00000158399 131 ntBASIC16.01■□□□□ 0.15
Vps50Q8CI71 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Vps50Q8CI71 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps50Q8CI71 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps50Q8CI71 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Vps50Q8CI71 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps50Q8CI71 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16■□□□□ 0.15
Vps50Q8CI71 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps50Q8CI71 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps50Q8CI71 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Vps50Q8CI71 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps50Q8CI71 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Vps50Q8CI71 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps50Q8CI71 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Vps50Q8CI71 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps50Q8CI71 AA414768-201ENSMUST00000121924 1257 ntBASIC16■□□□□ 0.15
Vps50Q8CI71 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16■□□□□ 0.15
Vps50Q8CI71 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps50Q8CI71 Gm17661-201ENSMUST00000170317 270 ntBASIC16■□□□□ 0.15
Vps50Q8CI71 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16■□□□□ 0.15
Vps50Q8CI71 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16■□□□□ 0.15
Vps50Q8CI71 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Vps50Q8CI71 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps50Q8CI71 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps50Q8CI71 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16■□□□□ 0.15
Vps50Q8CI71 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16■□□□□ 0.15
Vps50Q8CI71 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms