Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip3Q8CHD8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip3Q8CHD8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip3Q8CHD8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip3Q8CHD8 Gm4459-201ENSMUST00000118750 468 ntBASIC21.01■□□□□ 0.95
Rab11fip3Q8CHD8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
Rab11fip3Q8CHD8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip3Q8CHD8 Gm43514-201ENSMUST00000198852 424 ntBASIC21.01■□□□□ 0.95
Rab11fip3Q8CHD8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip3Q8CHD8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip3Q8CHD8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip3Q8CHD8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Rab11fip3Q8CHD8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip3Q8CHD8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Rab11fip3Q8CHD8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip3Q8CHD8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip3Q8CHD8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip3Q8CHD8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip3Q8CHD8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip3Q8CHD8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip3Q8CHD8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab11fip3Q8CHD8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rab11fip3Q8CHD8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip3Q8CHD8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip3Q8CHD8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip3Q8CHD8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip3Q8CHD8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip3Q8CHD8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip3Q8CHD8 Gm10060-201ENSMUST00000212002 111 ntBASIC20.99■□□□□ 0.95
Rab11fip3Q8CHD8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip3Q8CHD8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip3Q8CHD8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip3Q8CHD8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip3Q8CHD8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip3Q8CHD8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip3Q8CHD8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab11fip3Q8CHD8 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.99■□□□□ 0.95
Rab11fip3Q8CHD8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rab11fip3Q8CHD8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rab11fip3Q8CHD8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rab11fip3Q8CHD8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rab11fip3Q8CHD8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rab11fip3Q8CHD8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rab11fip3Q8CHD8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC20.98■□□□□ 0.95
Rab11fip3Q8CHD8 Gm2651-201ENSMUST00000203560 838 ntBASIC20.98■□□□□ 0.95
Rab11fip3Q8CHD8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC20.98■□□□□ 0.95
Rab11fip3Q8CHD8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC20.98■□□□□ 0.95
Rab11fip3Q8CHD8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC20.98■□□□□ 0.95
Rab11fip3Q8CHD8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC20.98■□□□□ 0.95
Rab11fip3Q8CHD8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rab11fip3Q8CHD8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rab11fip3Q8CHD8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rab11fip3Q8CHD8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rab11fip3Q8CHD8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Rab11fip3Q8CHD8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Rab11fip3Q8CHD8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip3Q8CHD8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip3Q8CHD8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip3Q8CHD8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Rab11fip3Q8CHD8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Rab11fip3Q8CHD8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip3Q8CHD8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC20.97■□□□□ 0.95
Rab11fip3Q8CHD8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip3Q8CHD8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip3Q8CHD8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip3Q8CHD8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip3Q8CHD8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip3Q8CHD8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip3Q8CHD8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip3Q8CHD8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Rab11fip3Q8CHD8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rab11fip3Q8CHD8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Rab11fip3Q8CHD8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rab11fip3Q8CHD8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms