Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.83■□□□□ 0.28
Rp1l1Q8CGM2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.83■□□□□ 0.28
Rp1l1Q8CGM2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rp1l1Q8CGM2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rp1l1Q8CGM2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rp1l1Q8CGM2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rp1l1Q8CGM2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rp1l1Q8CGM2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rp1l1Q8CGM2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rp1l1Q8CGM2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Rp1l1Q8CGM2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rp1l1Q8CGM2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rp1l1Q8CGM2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rp1l1Q8CGM2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rp1l1Q8CGM2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rp1l1Q8CGM2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rp1l1Q8CGM2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rp1l1Q8CGM2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rp1l1Q8CGM2 Gm7787-201ENSMUST00000216858 688 ntBASIC16.82■□□□□ 0.28
Rp1l1Q8CGM2 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.82■□□□□ 0.28
Rp1l1Q8CGM2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rp1l1Q8CGM2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Rp1l1Q8CGM2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rp1l1Q8CGM2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Rp1l1Q8CGM2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rp1l1Q8CGM2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rp1l1Q8CGM2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.8■□□□□ 0.28
Rp1l1Q8CGM2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.8■□□□□ 0.28
Rp1l1Q8CGM2 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.8■□□□□ 0.28
Rp1l1Q8CGM2 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.8■□□□□ 0.28
Rp1l1Q8CGM2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rp1l1Q8CGM2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rp1l1Q8CGM2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rp1l1Q8CGM2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rp1l1Q8CGM2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rp1l1Q8CGM2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rp1l1Q8CGM2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rp1l1Q8CGM2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rp1l1Q8CGM2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rp1l1Q8CGM2 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rp1l1Q8CGM2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rp1l1Q8CGM2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.8■□□□□ 0.28
Rp1l1Q8CGM2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.8■□□□□ 0.28
Rp1l1Q8CGM2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rp1l1Q8CGM2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rp1l1Q8CGM2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rp1l1Q8CGM2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rp1l1Q8CGM2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.79■□□□□ 0.28
Rp1l1Q8CGM2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rp1l1Q8CGM2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rp1l1Q8CGM2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rp1l1Q8CGM2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rp1l1Q8CGM2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rp1l1Q8CGM2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rp1l1Q8CGM2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Rp1l1Q8CGM2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rp1l1Q8CGM2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rp1l1Q8CGM2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.79■□□□□ 0.28
Rp1l1Q8CGM2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rp1l1Q8CGM2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rp1l1Q8CGM2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
Rp1l1Q8CGM2 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.79■□□□□ 0.28
Rp1l1Q8CGM2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rp1l1Q8CGM2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rp1l1Q8CGM2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rp1l1Q8CGM2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rp1l1Q8CGM2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rp1l1Q8CGM2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.78■□□□□ 0.28
Rp1l1Q8CGM2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rp1l1Q8CGM2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.78■□□□□ 0.28
Rp1l1Q8CGM2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rp1l1Q8CGM2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rp1l1Q8CGM2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rp1l1Q8CGM2 Gm15358-201ENSMUST00000119249 520 ntBASIC16.78■□□□□ 0.28
Rp1l1Q8CGM2 Gm27301-201ENSMUST00000184012 127 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms