Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbm28Q8CGC6 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rbm28Q8CGC6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rbm28Q8CGC6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.22■□□□□ 0.67
Rbm28Q8CGC6 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rbm28Q8CGC6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rbm28Q8CGC6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rbm28Q8CGC6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rbm28Q8CGC6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rbm28Q8CGC6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rbm28Q8CGC6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rbm28Q8CGC6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rbm28Q8CGC6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rbm28Q8CGC6 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.21■□□□□ 0.67
Rbm28Q8CGC6 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rbm28Q8CGC6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rbm28Q8CGC6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rbm28Q8CGC6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rbm28Q8CGC6 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.21■□□□□ 0.67
Rbm28Q8CGC6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rbm28Q8CGC6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.21■□□□□ 0.67
Rbm28Q8CGC6 Rprl3-201ENSMUST00000157400 290 ntBASIC19.21■□□□□ 0.67
Rbm28Q8CGC6 Mir8098-201ENSMUST00000184011 137 ntBASIC19.21■□□□□ 0.67
Rbm28Q8CGC6 Gm44430-201ENSMUST00000203376 995 ntBASIC19.21■□□□□ 0.67
Rbm28Q8CGC6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rbm28Q8CGC6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rbm28Q8CGC6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rbm28Q8CGC6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.2■□□□□ 0.66
Rbm28Q8CGC6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rbm28Q8CGC6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.2■□□□□ 0.66
Rbm28Q8CGC6 Gm44771-201ENSMUST00000206975 626 ntBASIC19.2■□□□□ 0.66
Rbm28Q8CGC6 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.2■□□□□ 0.66
Rbm28Q8CGC6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.2■□□□□ 0.66
Rbm28Q8CGC6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rbm28Q8CGC6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rbm28Q8CGC6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rbm28Q8CGC6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rbm28Q8CGC6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rbm28Q8CGC6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rbm28Q8CGC6 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rbm28Q8CGC6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rbm28Q8CGC6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rbm28Q8CGC6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rbm28Q8CGC6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rbm28Q8CGC6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rbm28Q8CGC6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rbm28Q8CGC6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rbm28Q8CGC6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rbm28Q8CGC6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.18■□□□□ 0.66
Rbm28Q8CGC6 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rbm28Q8CGC6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rbm28Q8CGC6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rbm28Q8CGC6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rbm28Q8CGC6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rbm28Q8CGC6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rbm28Q8CGC6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rbm28Q8CGC6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rbm28Q8CGC6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rbm28Q8CGC6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rbm28Q8CGC6 Gm5864-201ENSMUST00000202263 970 ntBASIC19.18■□□□□ 0.66
Rbm28Q8CGC6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rbm28Q8CGC6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rbm28Q8CGC6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rbm28Q8CGC6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rbm28Q8CGC6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.18■□□□□ 0.66
Rbm28Q8CGC6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rbm28Q8CGC6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rbm28Q8CGC6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.18■□□□□ 0.66
Rbm28Q8CGC6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rbm28Q8CGC6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Rbm28Q8CGC6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rbm28Q8CGC6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rbm28Q8CGC6 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rbm28Q8CGC6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rbm28Q8CGC6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rbm28Q8CGC6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rbm28Q8CGC6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms