Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ShfQ8CG80 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ShfQ8CG80 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ShfQ8CG80 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.55□□□□□ -0.08
ShfQ8CG80 Gm16061-201ENSMUST00000122167 857 ntBASIC14.55□□□□□ -0.08
ShfQ8CG80 Gm29707-201ENSMUST00000196325 491 ntBASIC14.55□□□□□ -0.08
ShfQ8CG80 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.55□□□□□ -0.08
ShfQ8CG80 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ShfQ8CG80 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.55□□□□□ -0.08
ShfQ8CG80 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ShfQ8CG80 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
ShfQ8CG80 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ShfQ8CG80 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ShfQ8CG80 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ShfQ8CG80 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
ShfQ8CG80 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ShfQ8CG80 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ShfQ8CG80 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ShfQ8CG80 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ShfQ8CG80 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ShfQ8CG80 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ShfQ8CG80 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
ShfQ8CG80 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.54□□□□□ -0.08
ShfQ8CG80 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ShfQ8CG80 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
ShfQ8CG80 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
ShfQ8CG80 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ShfQ8CG80 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ShfQ8CG80 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ShfQ8CG80 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ShfQ8CG80 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.54□□□□□ -0.08
ShfQ8CG80 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ShfQ8CG80 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
ShfQ8CG80 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ShfQ8CG80 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.54□□□□□ -0.08
ShfQ8CG80 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.54□□□□□ -0.08
ShfQ8CG80 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.54□□□□□ -0.08
ShfQ8CG80 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ShfQ8CG80 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.54□□□□□ -0.08
ShfQ8CG80 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ShfQ8CG80 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.54□□□□□ -0.08
ShfQ8CG80 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ShfQ8CG80 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ShfQ8CG80 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ShfQ8CG80 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ShfQ8CG80 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ShfQ8CG80 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ShfQ8CG80 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ShfQ8CG80 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ShfQ8CG80 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ShfQ8CG80 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.53□□□□□ -0.08
ShfQ8CG80 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ShfQ8CG80 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ShfQ8CG80 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ShfQ8CG80 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ShfQ8CG80 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ShfQ8CG80 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ShfQ8CG80 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ShfQ8CG80 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
ShfQ8CG80 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ShfQ8CG80 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ShfQ8CG80 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ShfQ8CG80 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ShfQ8CG80 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.53□□□□□ -0.08
ShfQ8CG80 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ShfQ8CG80 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ShfQ8CG80 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
ShfQ8CG80 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ShfQ8CG80 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ShfQ8CG80 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ShfQ8CG80 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ShfQ8CG80 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ShfQ8CG80 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ShfQ8CG80 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ShfQ8CG80 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ShfQ8CG80 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
ShfQ8CG80 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
ShfQ8CG80 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ShfQ8CG80 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
ShfQ8CG80 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.52□□□□□ -0.09
ShfQ8CG80 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
ShfQ8CG80 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
ShfQ8CG80 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.52□□□□□ -0.09
ShfQ8CG80 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ShfQ8CG80 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ShfQ8CG80 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ShfQ8CG80 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ShfQ8CG80 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ShfQ8CG80 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.52□□□□□ -0.09
ShfQ8CG80 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ShfQ8CG80 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.52□□□□□ -0.09
ShfQ8CG80 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ShfQ8CG80 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ShfQ8CG80 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ShfQ8CG80 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ShfQ8CG80 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.52□□□□□ -0.09
ShfQ8CG80 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ShfQ8CG80 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ShfQ8CG80 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ShfQ8CG80 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms