Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smc5Q8CG46 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc5Q8CG46 Gm11336-201ENSMUST00000118168 334 ntBASIC20.17■□□□□ 0.82
Smc5Q8CG46 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smc5Q8CG46 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Smc5Q8CG46 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc5Q8CG46 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc5Q8CG46 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smc5Q8CG46 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smc5Q8CG46 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc5Q8CG46 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Smc5Q8CG46 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc5Q8CG46 Gm5421-201ENSMUST00000181698 2354 ntBASIC20.16■□□□□ 0.82
Smc5Q8CG46 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC20.16■□□□□ 0.82
Smc5Q8CG46 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Smc5Q8CG46 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc5Q8CG46 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc5Q8CG46 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc5Q8CG46 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc5Q8CG46 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc5Q8CG46 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Smc5Q8CG46 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc5Q8CG46 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc5Q8CG46 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc5Q8CG46 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc5Q8CG46 AC163637.1-201ENSMUST00000215491 1894 ntBASIC20.16■□□□□ 0.82
Smc5Q8CG46 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc5Q8CG46 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Smc5Q8CG46 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc5Q8CG46 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc5Q8CG46 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc5Q8CG46 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smc5Q8CG46 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.15■□□□□ 0.82
Smc5Q8CG46 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc5Q8CG46 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc5Q8CG46 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc5Q8CG46 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc5Q8CG46 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smc5Q8CG46 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Smc5Q8CG46 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc5Q8CG46 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC20.15■□□□□ 0.82
Smc5Q8CG46 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc5Q8CG46 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Smc5Q8CG46 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Smc5Q8CG46 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Smc5Q8CG46 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Smc5Q8CG46 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.82
Smc5Q8CG46 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Smc5Q8CG46 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC20.14■□□□□ 0.81
Smc5Q8CG46 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smc5Q8CG46 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc5Q8CG46 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Smc5Q8CG46 Gm45212-201ENSMUST00000205831 3403 ntBASIC20.14■□□□□ 0.81
Smc5Q8CG46 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc5Q8CG46 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc5Q8CG46 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc5Q8CG46 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc5Q8CG46 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc5Q8CG46 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smc5Q8CG46 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Smc5Q8CG46 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Smc5Q8CG46 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Smc5Q8CG46 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.14■□□□□ 0.81
Smc5Q8CG46 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smc5Q8CG46 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc5Q8CG46 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC20.12■□□□□ 0.81
Smc5Q8CG46 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC20.12■□□□□ 0.81
Smc5Q8CG46 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc5Q8CG46 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc5Q8CG46 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc5Q8CG46 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc5Q8CG46 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc5Q8CG46 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Smc5Q8CG46 Gm16061-201ENSMUST00000122167 857 ntBASIC20.12■□□□□ 0.81
Smc5Q8CG46 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smc5Q8CG46 Gm7213-201ENSMUST00000215977 950 ntBASIC20.12■□□□□ 0.81
Smc5Q8CG46 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms