Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.15■□□□□ 0.18
Lrif1Q8CDD9 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.15■□□□□ 0.18
Lrif1Q8CDD9 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.15■□□□□ 0.18
Lrif1Q8CDD9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrif1Q8CDD9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrif1Q8CDD9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrif1Q8CDD9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrif1Q8CDD9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lrif1Q8CDD9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrif1Q8CDD9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrif1Q8CDD9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lrif1Q8CDD9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrif1Q8CDD9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lrif1Q8CDD9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lrif1Q8CDD9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lrif1Q8CDD9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lrif1Q8CDD9 Asic1-205ENSMUST00000228185 1818 ntBASIC16.15■□□□□ 0.18
Lrif1Q8CDD9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Lrif1Q8CDD9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrif1Q8CDD9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.14■□□□□ 0.17
Lrif1Q8CDD9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrif1Q8CDD9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.14■□□□□ 0.17
Lrif1Q8CDD9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lrif1Q8CDD9 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.14■□□□□ 0.17
Lrif1Q8CDD9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrif1Q8CDD9 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.14■□□□□ 0.17
Lrif1Q8CDD9 Gm5417-201ENSMUST00000079706 384 ntBASIC16.14■□□□□ 0.17
Lrif1Q8CDD9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrif1Q8CDD9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lrif1Q8CDD9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lrif1Q8CDD9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrif1Q8CDD9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.14■□□□□ 0.17
Lrif1Q8CDD9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrif1Q8CDD9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrif1Q8CDD9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrif1Q8CDD9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lrif1Q8CDD9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lrif1Q8CDD9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Gm15565-201ENSMUST00000118890 427 ntBASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrif1Q8CDD9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrif1Q8CDD9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrif1Q8CDD9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Lrif1Q8CDD9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrif1Q8CDD9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrif1Q8CDD9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrif1Q8CDD9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrif1Q8CDD9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrif1Q8CDD9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrif1Q8CDD9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrif1Q8CDD9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrif1Q8CDD9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.11■□□□□ 0.17
Lrif1Q8CDD9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms